KEGG   Helicobacter mastomyrinus: V3I05_07025
Entry
V3I05_07025       CDS       T11030                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hmy  Helicobacter mastomyrinus
Pathway
hmy03030  DNA replication
hmy03430  Mismatch repair
hmy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hmy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    V3I05_07025
   03430 Mismatch repair
    V3I05_07025
   03440 Homologous recombination
    V3I05_07025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hmy03032]
    V3I05_07025
   03400 DNA repair and recombination proteins [BR:hmy03400]
    V3I05_07025
Enzymes [BR:hmy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     V3I05_07025
DNA replication proteins [BR:hmy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     V3I05_07025
DNA repair and recombination proteins [BR:hmy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     V3I05_07025
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1 APAF1_C
Other DBs
NCBI-ProteinID: XAM17436
UniProt: A0ABZ3F5T8
LinkDB
Position
1395016..1395780
AA seq 254 aa
MTYPQLFDKLRHNPIPQKQFYMYIKNIGGLYADVESELELLKGAGAPLDVEEQNGERYFY
LNTHARLWQKSNLVFVDIETNGSKPQSSEIIEIGALKVREGKIIESFESYVYASCVPENI
TELTGITEADIATAPHRDEVLAQFRRFLDDGVFVAHNVNFDYSFLDYHLRQCGMFGIFNP
KLCTIELARKTIPSQRYALSYLNDFLGIHTPISHRAYADALTSFRIFEIAMIMFPPNIQS
IQDLIDFSKGRLKL
NT seq 765 nt   +upstreamnt  +downstreamnt
atgacatatccgcagctttttgataaattgcgtcataatccaataccacaaaagcaattc
tatatgtatattaaaaatataggagggctttatgctgatgtggagagtgagcttgagctg
cttaaaggtgcgggtgcgcctttagacgtggaggagcaaaatggagagcggtatttctac
cttaatacacacgctagattatggcaaaagagcaatttggtgtttgtagatattgaaacc
aatggctctaagcctcaaagtagcgagattatagagattggtgcgctgaaagtgcgggag
gggaaaattatagaatcttttgaaagctatgtctatgcttcctgtgtgccagagaatatt
acagagcttacgggtattacagaggcagatattgctactgctcctcatagagatgaagtt
ttagcgcaatttagaagattcttagatgatggtgtgtttgtggcgcataatgtgaatttt
gattatagctttttggattatcatttgcgtcagtgcggtatgtttgggatttttaaccct
aagctttgcacgattgaacttgctagaaagactatcccttcccagcgatatgctctctcc
tatctcaatgattttttaggcatacacacgcctatttcgcatcgtgcctatgccgatgcg
ctcacttcttttagaatctttgaaattgcgatgataatgtttcctcctaatatacaaagc
atacaggatttgattgacttctctaaagggcggctcaaactttaa

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