Helicobacter mastomyrinus: V3I05_07090
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Entry
V3I05_07090 CDS
T11030
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hmy Helicobacter mastomyrinus
Pathway
hmy00300
Lysine biosynthesis
hmy00470
D-Amino acid metabolism
hmy01100
Metabolic pathways
hmy01110
Biosynthesis of secondary metabolites
hmy01120
Microbial metabolism in diverse environments
hmy01230
Biosynthesis of amino acids
Module
hmy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hmy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V3I05_07090 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V3I05_07090 (lysA)
Enzymes [BR:
hmy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
V3I05_07090 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
XAM17447
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All DBs
Position
complement(1408356..1409639)
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AA seq
427 aa
AA seq
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MDYLDLAKTYQTPLYVYDLGAITHAFNAIKDAFKARKSLICYALKANSNLSIIHHLATLG
SGADCVSIGEVKRALKAGIPKYKIIFSGVGKRDDEILQALQADILFINVESEEELTRIES
LAKSINTIARISVRVNPNIDAKTHPYISTGLHENKFGVDIEQAKSMYIFAKNSPFLEPVG
IHFHIGSQLTELEPIKQAAQKIAELAHSLLALKIDLKFFDVGGGIGIQYTNETLINPYDY
TQAILGALYGLDLTIICEPGRFLVGNSGVLLTSVLYEKHNGTKRFVIVDAAMNDLIRPAL
YHATHTIKCLSQSKQGQNDSAKLCDIVGPICESSDFLAKNIALPPLSTGDVLMIRDAGAY
GYSMASNYNTRPRPAEVAFMGENVRLIKHRENIESMLKDEEKLLQEYKNDTAKSIHSKKG
IENDTTR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggattatcttgatcttgcaaaaacctatcaaacaccactttatgtgtatgatttaggg
gctatcactcacgcatttaatgcaataaaagacgctttcaaggcacgcaaatcacttatc
tgctacgcattaaaagcaaattcaaatctctctattatccaccatttagccacgcttggc
agtggagcggattgtgtgtctattggtgaggtaaagagggcgttaaaagcggggattcct
aagtataagattatttttagcggtgtggggaaacgtgatgatgagattctacaagccttg
caagcggatattttatttatcaatgtagagagtgaggaggaattaacgcgtatagaatct
ttagcaaaaagcattaatacaatcgcgcggatctctgtgcgggtcaatcctaatatcgat
gctaaaacgcacccctacatctccacaggtttgcacgaaaacaagtttggcgtagatata
gaacaagctaaatcaatgtatatttttgcgaaaaattccccatttcttgagcctgtgggg
attcactttcatatcggctcccaacttacagagctagagcccatcaaacaagcagcgcaa
aaaatcgcagaactcgcccatagtctcctagcacttaaaattgatttgaagttttttgat
gtaggtggaggcattggcatacaatatactaatgaaacacttattaatccttatgactat
acacaggcgattttaggagcattatatgggcttgatttgacaattatttgtgagcccgga
cgtttccttgtgggcaatagcggtgtgctactcacaagtgtgctttatgagaagcacaat
ggcacaaagcgatttgtaattgtcgatgcagcgatgaatgacctcatacgtcccgcactc
taccacgctacacatacgataaaatgcctctcacaaagcaaacaaggacaaaatgatagc
gcgaagttatgcgatattgtgggacccatttgtgaaagtagcgattttttggctaaaaac
attgccctgcccccacttagcacaggagatgtgctaatgatacgtgatgcaggggcgtat
ggatatagtatggcgagcaactacaacactcgtccgcgcccggctgaagtagcatttatg
ggtgaaaatgtgcgacttatcaagcatagagaaaatatagaatctatgctcaaagatgaa
gaaaagctattgcaagaatataaaaacgatacagcaaaatctattcatagcaaaaagggg
atagagaatgacaccacaagatga
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