KEGG   Helicobacter mastomyrinus: V3I05_09025
Entry
V3I05_09025       CDS       T11030                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
hmy  Helicobacter mastomyrinus
Pathway
hmy00470  D-Amino acid metabolism
hmy00550  Peptidoglycan biosynthesis
hmy01100  Metabolic pathways
hmy01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:hmy00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    V3I05_09025
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    V3I05_09025
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    V3I05_09025
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hmy01011]
    V3I05_09025
Enzymes [BR:hmy01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     V3I05_09025
Peptidoglycan biosynthesis and degradation proteins [BR:hmy01011]
 Precursor biosynthesis
  Amino acid ligase
   V3I05_09025
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp ATP-grasp_4 GARS_A
Other DBs
NCBI-ProteinID: XAM17819
UniProt: A0ABZ3F3R5
LinkDB
Position
1782835..1783887
AA seq 350 aa
MKYDVLFGGVSFEHEISIVSAIALKKVLGADIEHFIFLDSKHRFYLISAENMKSKYFSSG
DYQKCTEIFLRNGAFCKKSLFGFSPLTSHIVINLIHGADGEDGSISAMLDFYHLPFIGPR
IESGVMSFNKALTKIFAHQRGVKSLDYEILTRANSHISHLQYPLILKPARLGSSIGVSVV
NEPKELEYAMDLAFEYDDSIVAEHFQSGIKEYNLAGCKVKKGAESVYRYSIIEEPSKKEL
LDFEHKYLDFSRTSQVLKADISQDLEKKLKESFAKLYENAFEGALIRCDFFVIDDEVYLN
EINPVPGSMANYLFADFGAVLAELALNLPKKHSIKVSYKYIEQIHHAKGK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgaaatatgatgtgctatttggtggtgtgagctttgaacacgaaattagcatagtgagt
gcgattgccttaaaaaaggtgctaggagcggacatagagcattttatattccttgatagc
aaacatcgcttttatcttatctccgcagagaatatgaagtcaaaatactttagctcgggg
gattatcaaaaatgcacggaaatttttttacgcaatggggcattttgcaaaaaatcactt
tttggctttagccccttaacttctcatattgtgattaatctcatacacggggctgatggg
gaagatggtagtataagcgcaatgcttgatttctatcatttgcctttcattggtccaagg
atagaatctggcgtgatgagctttaataaggctttgacaaagatttttgctcatcaaaga
ggtgtaaagagccttgattatgagattctaacaagagcaaattcgcatatttctcatttg
caatatccgctgattcttaaacccgcacgattgggaagttctatcggtgtaagtgtggta
aatgagcctaaagagctagagtatgcaatggacttagcctttgagtacgatgatagcatt
gtggcagagcattttcaaagtggcattaaagaatataatctcgcaggctgtaaggtcaaa
aaaggcgcggagagtgtgtataggtattctatcatcgaagagcctagcaaaaaagaatta
cttgattttgagcataaatatttagatttttcccgcacgtcacaggtgttgaaagcggat
attagtcaagatttagagaaaaaacttaaagaaagctttgcaaaactttatgaaaatgcc
tttgaaggagcgttgatacgatgtgatttttttgtgattgatgatgaggtgtatctcaac
gagattaatcccgtgcctggctcgatggcaaactatctgtttgcggattttggggcggta
ttagcagaattagccttaaatttgccaaaaaaacattctatcaaggtaagctataaatat
atagagcagattcatcacgcaaagggaaaatag

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