Hydrocurvibacter mobilis: WCX87_00610
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Entry
WCX87_00610 CDS
T11200
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hmz Hydrocurvibacter mobilis
Brite
KEGG Orthology (KO) [BR:
hmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmz03032
]
WCX87_00610 (topA)
03400 DNA repair and recombination proteins [BR:
hmz03400
]
WCX87_00610 (topA)
Enzymes [BR:
hmz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
WCX87_00610 (topA)
DNA replication proteins [BR:
hmz03032
]
Prokaryotic type
DNA Topoisomerases
WCX87_00610 (topA)
DNA repair and recombination proteins [BR:
hmz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WCX87_00610 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DmmA-like_C
Zn_ribbon_RPB9
DUF7129
Zn_Ribbon_TF
A2L_zn_ribbon
O-FucT
Motif
Other DBs
NCBI-ProteinID:
XAU07891
LinkDB
All DBs
Position
complement(116781..119006)
Genome browser
AA seq
741 aa
AA seq
DB search
MDLIIVESPAKARTIKNFLGKGYEVIASKGHIRDLPKSRFGITVDDNNELTPTYSVAKEN
SGVVKEIQELAKKADTIYIATDEDREGEAIGWHIAYAIKKDPETLPRIVFHEITKTAIMH
ALETARSIDMNRVNAQQTRRLLDRIVGYKLSPLLSSKIQKGLSAGRVQSSTLKIIVDRER
EIKAFVPQEYWSIDTIFKPEIEANLTSFYGDKIEKLSIKNADEAKKIVAEIQKDSFIVSS
IETKQRKSSTPPPFMTSTLQQTASSKLGFSPKKTMMIAQSLYEGVKTPEGTSGVITYMRT
DSLNMAKEAVDAVREEISKRYGDKYIPASPKVYAKKSKGAQEAHEAIRPTMLQFTPEVAA
KYLKADEIKLYKLIYERFMACQMNDAIFEQQSITFSGKNSEYKATGRKLIFDGFYKVLGS
DDKDKLLPTLKENEPIDIKSIVPTQHFTEPPARYSEASIIKKLEAEGIGRPSTYAPTIST
LTVRTYINVEKKQLVPTEMAFTVTELLEKHFKEIVDASFTANMEEDLDEIAEGHKDWQKT
LKDFYFPFMEEIEEGKKNIVSTKLAQPTGKNCPKCGSELLLRSGRYGNFIACSGFPKCKY
TEQVEGEENEEKAPAETSDEKCEKCGSDMIVKSGRNGKFLACSAYPKCKNTKALESTTKE
SEIPCPDCGGKLLFRQSRRGAFWGCENYPECKFISKFEPTALRCKEDGCNGVLAARVYRN
KDVYECIKCKNRTPRESEEKE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
ttggacttaattatcgtcgaatcaccggcaaaagcacgaacaatcaaaaactttttagga
aaagggtatgaagtcatagcttcaaaagggcatattcgtgaccttcctaaatcacgcttt
ggaataacagtggatgacaacaatgagcttactcccacttacagcgttgcaaaagagaac
agcggtgtcgttaaagagatacaggaactggcaaagaaagcagataccatctatatcgcg
accgatgaggaccgcgagggagaagcgataggctggcatatcgcctatgcgatcaaaaaa
gatcctgagactctgcctaggatagtgtttcacgagatcactaaaactgctatcatgcat
gcactagagactgcacgcagtatagatatgaaccgcgtaaatgcacagcagacacgtcgt
ctgcttgacagaatagtcggttacaaactctctccgctacttagctctaagatacaaaaa
gggctctcagcaggacgtgtccagtcatcgactctgaagatcatcgtcgaccgcgaacgc
gagatcaaagcgtttgtccctcaagaatactggagcatagacactatctttaaacctgag
atcgaagcaaatctgacatctttttacggtgacaagatagaaaagctctctattaaaaat
gcagatgaagcgaaaaagatagtcgctgagatacaaaaagactcctttatcgtctcttct
atcgagacgaaacaacgtaaaagctcgactcctccgccgtttatgacatcgactctgcag
cagacagcgtcaagcaagcttggattctctccgaaaaagacgatgatgatcgcacagtct
ctttatgagggtgtcaagactcccgaaggaacttcaggtgttatcacatatatgcgtacc
gattcattgaatatggcaaaagaagcagttgatgcggtaagagaagagatctctaagaga
tatggagataaatatatccctgcatctcctaaagtctatgcgaaaaaatcaaagggtgca
caagaagcgcacgaggcgatccgtcctactatgcttcaattcactcctgaagtagcggca
aaatatctgaaagcagatgagatcaaactctataagcttatatatgaaagatttatggct
tgtcagatgaacgatgctatttttgagcagcaaagcatcacgttcagcggtaaaaactct
gaatacaaagcgacgggaagaaaactgatatttgacggtttctataaagtcttaggaagc
gatgacaaagacaagcttcttcctactttaaaagagaatgaaccgatagacatcaaatct
atcgtaccgactcagcattttactgaaccgcccgcgcgttacagtgaagcttctattatt
aagaaacttgaagctgaggggataggccgtccgtctacgtatgcacctactatctcgaca
ttgactgttagaacctatataaacgtagagaaaaaacagctggtaccgactgagatggct
tttaccgtgactgaactcttagaaaaacactttaaagagatcgtcgatgcttcttttacg
gcaaatatggaagaggacttggatgagatagccgaaggtcacaaagactggcaaaagact
ctaaaagatttctatttcccatttatggaagagatcgaagagggtaaaaagaacatcgtc
agcacaaaactggcacagcctacgggtaaaaactgtccaaaatgcggaagcgaacttctc
cttcgttcagggcgctacggaaactttatcgcgtgtagcggattccctaagtgtaaatat
accgaacaggtagagggtgaagaaaacgaagagaaagctccagctgagaccagtgatgaa
aaatgtgagaagtgcggcagcgatatgatcgtaaaaagcggccgtaacggtaagttctta
gcatgtagcgcttaccctaaatgtaaaaacactaaagcgttagagtctacgacaaaagaa
tctgagatcccttgtcctgactgcggtggaaaacttctcttccgccaatcaagaagaggt
gcattctggggatgtgagaactatccggagtgtaaattcatctctaaattcgaaccgacg
gctcttagatgtaaagaggacggctgtaacggcgtactcgcagcaagagtatatagaaat
aaagatgtttacgagtgtataaaatgtaaaaaccgtactcctagagagagtgaagagaaa
gagtaa
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