Hydrocurvibacter mobilis: WCX87_05440
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Entry
WCX87_05440 CDS
T11200
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
hmz Hydrocurvibacter mobilis
Pathway
hmz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hmz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WCX87_05440 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmz03021
]
WCX87_05440 (rpoD)
Transcription machinery [BR:
hmz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WCX87_05440 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
MCR_beta_N
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
XAU08869
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All DBs
Position
complement(1081766..1083682)
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AA seq
638 aa
AA seq
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MRQNERKTQDTSEHFYMTAKELTKALEDLFIEKKSTHECVTYESIIKLLEKQPTAAQAKN
IYKLATKHDKCLYTSSEHAKMLNDREAEAKRNAQIKMLENNESDSFDILKEHELLEWSRS
DSPVRMYLREMGQIPLLTKDEEIEISKKIEIGESIIIDAICSVPYLIDFILDYKEPLINR
ERRVKELFKSFEDEKEDDDSDDDSDDIEETDEENSERVFSAKDKKRVEKVVFSFKALEKA
KKDWVKAADKVLEINSDELSEDLVLLMLTATFKKSILKEKLLDLGPTSKLINELVKSMET
ALKSDEGFDKELRRLEYKLPLFNDTLKENHQKILDKICDLSKEDITAMVPEATMVSTYVE
IKKLIQTKEASKDSFNMEPDKLADILEQIKRGKNISEVSKTRMAKSNLRLVVSIAKRYTN
RGLPFLDLIQEGNIGLMKAVDKFEYKKGYKFSTYATWWIRQAISRAIADQARTIRIPIHM
IETINRINKIMRKHLQEHGKEPDVEIIAKEVGLSVEKVKNVIKITKEPISLEAPIGNEDD
GRFGDFIEDKTSLSPSDVTLKDDLRIQIESVLEQLNEREKAVIKLRFGIMDDESDRTLEE
IGKELSVTRERVRQIESSAIKKLKHPKVGRKLKNYIEE
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
ataagacaaaatgaaagaaagacacaagatacttcggagcatttttatatgactgcaaaa
gaactaaccaaagcacttgaagatttatttattgaaaaaaaatctactcatgagtgtgtt
acctacgaatcaattataaagttgcttgaaaaacaaccgaccgctgctcaagctaagaat
atctataaattagcgacgaaacacgataaatgtctatatacatcatctgaacatgcgaag
atgttgaatgacagagaagcggaagcaaaaagaaacgctcagataaaaatgcttgaaaat
aatgaatctgattcatttgacatcttaaaagagcacgaacttcttgaatggtctcgttct
gattcacctgtcaggatgtacctgagagagatggggcagatccctcttttaacaaaagat
gaagagatagagatctctaaaaagatcgagataggcgaaagtatcatcatcgatgctatc
tgttctgttccgtatcttatagattttatcttagactacaaagaacctcttatcaaccgt
gaaagacgtgtaaaagaacttttcaaaagttttgaagacgaaaaagaggatgatgactct
gatgatgattctgatgatatcgaagaaacagatgaggagaacagtgaaagagtcttttct
gcaaaagataaaaaacgtgtcgaaaaagtagtcttcagctttaaagctttagaaaaagct
aaaaaagactgggttaaagctgctgataaagtacttgaaataaacagtgacgaactaagc
gaagatcttgttcttctaatgcttactgcaacgtttaaaaaatctatacttaaagaaaag
ctgttagacctgggaccaacttctaaacttatcaatgaacttgttaagtcgatggaaaca
gcactaaaaagtgatgaaggatttgataaagagttaagacgtcttgaatacaaacttcca
ctttttaacgatacgttaaaagagaaccatcaaaagatccttgataagatctgtgacctt
tctaaagaggatatcacggcgatggtcccggaagctacaatggtcagcacttacgttgag
atcaaaaagcttatccagacgaaagaagcttcgaaagacagcttcaacatggaaccggat
aaactcgcagatatcttagaacagataaaacgcggtaaaaacatatctgaagtctctaag
actcgtatggctaagtcaaaccttcgtcttgtcgtatctatcgctaagcgttatacaaat
agaggacttcctttccttgaccttatccaagagggtaatatcggtcttatgaaagcagtc
gataagtttgaatacaaaaaaggttataagttctctacttatgcgacttggtggatccgt
caggctatctcacgtgcgattgcagatcaagcaagaacgatccgtattccgatacatatg
atcgagactatcaaccgtatcaataagatcatgcgtaaacacctccaagagcatggaaaa
gagccggatgtcgagatcatcgcaaaagaggtcgggctttcagtcgagaaggtaaagaac
gttatcaagatcacgaaagagcctatctctcttgaagcacctatcgggaatgaagatgat
gggcgttttggagactttatcgaagataagacatctctatctccgtcagacgtcactcta
aaagatgacctgcgcattcagatcgaaagtgtcttagagcagttgaatgagcgtgaaaaa
gcagttatcaaactacgtttcgggatcatggatgatgaaagtgacagaacactagaagag
atcggtaaagagttaagcgtgactcgtgaacgtgtacgtcaaatagaatcaagtgctatt
aaaaagctaaaacaccctaaagtgggtcgtaaacttaaaaattatatagaagaataa
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