Hydrocurvibacter mobilis: WCX87_06195
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Entry
WCX87_06195 CDS
T11200
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hmz Hydrocurvibacter mobilis
Pathway
hmz03030
DNA replication
hmz03430
Mismatch repair
hmz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WCX87_06195 (dnaE)
03430 Mismatch repair
WCX87_06195 (dnaE)
03440 Homologous recombination
WCX87_06195 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmz03032
]
WCX87_06195 (dnaE)
03400 DNA repair and recombination proteins [BR:
hmz03400
]
WCX87_06195 (dnaE)
Enzymes [BR:
hmz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WCX87_06195 (dnaE)
DNA replication proteins [BR:
hmz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WCX87_06195 (dnaE)
DNA repair and recombination proteins [BR:
hmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WCX87_06195 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XAU06791
LinkDB
All DBs
Position
complement(1233446..1237033)
Genome browser
AA seq
1195 aa
AA seq
DB search
MSKEPAFTHLHLHTEYSLLDGANKISNLVERTKELGMTSVAMTDHGNMFGAIDFYHQMKG
AGLKPIIGMEGYIHNGEDIDDKSTKQRFHICLFAKNEIGYKNLMYLSSKAFIDGFYYFPR
INKKELREHSEGLICTSACLQGEVNWHLNTQNERNVKNGALGYEGAKKAALEYKEIFGED
FYLELMRHGISDQMFIDEQVLTLARELDIKVVATNDTHYTYPDDAQYHEAFMCIGMNKLY
DDPNRMRHSVHEFYLKSPEQMARLFADIPEALEHTQEIVEKCQLELNLGNPTPPNFKFTK
EYAQKEGLGIDNVDDDESVPAKERKTAMDKNDAEYFIHRCRVGLEERLVHVPQERHAEYR
ERLEFEIEVINSMKFPGYMLIVWDFVKEAKNMGIAVGPGRGSAAGSLVAYSLEITDIDPM
KYDLLFERFLNPERVSMPDIDMDFMQARRGEIIDYVVKKYGRNQVAQIITFGSLLAKGVI
RDVARVLDMPLSQADKMAKLIPDELGITLNGKSKKGEFIEGAYQKEPKLVELVETDPQAA
RVWEFSKKLEGLKRNSGMHAAGVVISNEELWKKTPIYKPSGEETFVTQYSLNYLEDVDLI
KFDFLGLKTLDVIDNAIKLVKARYDVDVNWHAIDENDPKVYDVIRGGDTVGMFQIESSGM
QDLNRRLMPDSFEDLIAVLALYRPGPMESGMLDSFIERKHGREAIEYTFAEMEPILKPTY
GVIVYQEQVMQIVQTIGGFSLGYSDIIRRAMGKKKDMAVYNAEFSEGAQKQGHDYAKASK
LFDLIEKFAGYGFNKSHSAAYAMVTFQTAWLKTYYPNEFMAALLTSEKDNTDKVVKYIDE
VKHMGITLSPPDINDSQLEFSAITKDDQDVILFGLGAIKGVGKAAVLSILEVIKEGGEFS
SMEDFVNRIEPSKVNKRVIESIIKSGGFDRFGYSRKALLDQIDLLVDTAKKASDAKKNAM
GSLFGDDAEITQVKLDLKNSDEYELREILEFEKNTLGFYVSGHPLDSYREEMDGLTYTLS
SDIENIGDGSTAIFIGKVEEIQKKVSKKGNAFGIVTLMDFHGNIEMMLFSDKLEELQAMD
LNEPVAFKVKVTHTEMFTRISVMKVLTLKDVKKESKKVKTTIMEKPQEPLNISIHLNSAT
RELEELYTLVRRHPGKRALKLTIVSKLQNVVIESAIRVDNSILEELQKLEYINIL
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaagaaccagcatttacgcaccttcatcttcatacggaatattcacttttagac
ggtgcaaacaagatatcaaatttagtagaacgtacaaaagagctcggcatgacctctgtg
gcgatgacagaccacggaaatatgttcggcgcgatagatttctatcatcagatgaaaggc
gcgggactgaaacctatcatcgggatggaagggtacatccataacggtgaagatattgac
gataagtctacaaagcagcgttttcatatctgtctttttgcaaagaacgagatcggatac
aaaaatcttatgtatctttcgtcaaaagctttcattgacggtttttattactttcctcgt
atcaacaaaaaagagcttcgcgaacactctgaaggacttatatgtacctctgcatgtctt
caaggcgaagtcaactggcatcttaacacccaaaacgaacgtaatgtcaaaaacggtgca
ttagggtacgaaggcgcaaaaaaagcggctttggagtacaaagagatcttcggtgaggat
ttttacctagagcttatgcgtcacggcatctctgaccagatgtttatcgacgaacaggtt
ttgactcttgcaagagaacttgatattaaagtcgtcgctacaaacgacactcactataca
tatcctgacgatgcacagtaccatgaagcgtttatgtgtatcgggatgaataaactttat
gacgatccaaaccgtatgcgccactcggtacatgagttttatctcaagtcgcctgaacag
atggcacgtctttttgcggatatccctgaagcgctggagcatacgcaggagatagtcgag
aagtgccagcttgaactgaacctcggaaacccgacaccgccgaacttcaagtttaccaaa
gagtatgcacaaaaagagggactgggcatagacaacgtcgatgacgatgagagtgttcct
gcaaaagagcgcaaaacggctatggataaaaacgatgcagagtactttatccaccgctgc
cgcgtgggacttgaagagagacttgtacatgtaccgcaggaacgtcatgcagagtataga
gaaaggctggagtttgagatagaggtcatcaactctatgaaattcccgggatatatgctt
atcgtctgggacttcgttaaagaggctaaaaacatgggtattgccgtaggaccgggacgt
ggttctgctgctggaagtcttgttgcttacagcttggagatcaccgatatcgaccctatg
aaatatgatctgcttttcgagcgtttcttgaaccctgaacgtgtaagtatgcccgatatc
gatatggactttatgcaggcgcgccgcggcgagatcatcgactatgtcgttaaaaagtat
ggacgtaatcaggtcgcacagattatcactttcgggtcgcttcttgcaaaaggggtcatc
cgtgacgtcgcacgcgtacttgatatgccgctttcacaagctgataagatggcaaaactg
atccccgatgagcttggtatcacacttaacggaaagagtaaaaaaggcgagtttatcgag
ggtgcttaccaaaaagagccgaaactcgtagaacttgtagagacagatccgcaggctgcg
cgtgtctgggagttttctaaaaaacttgaaggattgaaacgtaactcgggaatgcatgcc
gcgggtgtggttatctcaaacgaagagctttggaaaaagacgcctatctataaaccatca
ggcgaggagacgttcgtcactcagtactcgctaaactaccttgaagatgtcgatcttatc
aagttcgacttcctggggctgaagacccttgacgttatcgacaatgcgatcaagctggta
aaagcgcgttatgacgtagatgtaaactggcatgccatagatgagaacgatcctaaggtc
tatgacgtgatccgcggcggagacacggtggggatgtttcagatagagtcttcagggatg
caggacctgaaccgccgtcttatgcctgacagcttcgaagacctgatcgcggtcttggca
ctttaccgtccgggtccgatggagtcggggatgcttgacagcttcatcgaacgtaaacac
gggcgtgaggcgatcgagtacacatttgccgagatggaaccgatactcaaacctacatac
ggggtcatcgtttaccaagaacaggtcatgcagatcgttcagacgatcggcggtttctct
ctgggatactcagatattatccgtcgtgcgatgggtaaaaagaaagatatggctgtctac
aatgccgagttcagtgagggtgcgcaaaagcagggtcacgattatgctaaagcttctaag
ctctttgaccttatcgagaagtttgcgggttacggatttaacaaatcccactcggcggct
tacgcgatggtcacatttcagacggcatggctgaagacctactatccaaacgagtttatg
gcggcacttctgacaagtgagaaagacaatactgacaaagtcgtaaaatatattgacgaa
gtcaaacacatgggcatcacgctttcaccgcctgatatcaatgactcgcagttagagttc
tcggcgatcacgaaggacgatcaggatgtcatcctttttggactgggagctatcaaaggg
gtcggaaaagcagcggtcctctccatcttagaagtcatcaaagagggtggagaattcagt
tcgatggaagatttcgtgaaccgaatcgagccgagcaaggtcaacaagcgagttatcgag
tctattataaaatcgggcggatttgacagattcggatattccagaaaagcgctgcttgat
cagatagatcttcttgtagatactgctaaaaaagcgagtgatgcaaagaaaaatgcgatg
ggcagtctttttggagatgatgccgagataactcaggtcaagcttgatctaaaaaattca
gatgagtatgaacttagagagattttggagtttgaaaaaaatacgctaggattttatgta
tccggtcacccgcttgacagttaccgtgaagagatggatggtctgacctatactctttct
tccgatatagagaacataggggacggttcaacggcgatctttatcggtaaagtcgaagag
atacagaagaaagtatctaaaaaagggaatgcttttggtatcgtgactttgatggacttt
cacggaaatatcgagatgatgctcttttccgataaacttgaagagctgcaggcgatggat
ctgaatgaacctgtcgcttttaaagtgaaagtcacacataccgagatgtttacgcgtatc
tctgttatgaaggtactgactttaaaagatgtaaaaaaagagtcgaagaaagtgaagacg
actattatggaaaaaccgcaggaaccgctcaatatcagtatccatcttaactctgcgaca
agagagttggaggaactttatacacttgtaagacgtcatccgggaaaacgtgcattgaaa
ctgacaatcgtttcaaaacttcaaaatgtcgtgatcgagtcggcgatacgagtcgacaac
tccattttagaagagttgcagaagcttgaatatataaatatcttgtaa
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