Hydrocurvibacter mobilis: WCX87_06960
Help
Entry
WCX87_06960 CDS
T11200
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hmz Hydrocurvibacter mobilis
Pathway
hmz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCX87_06960 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmz03019
]
WCX87_06960 (rny)
Messenger RNA biogenesis [BR:
hmz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WCX87_06960 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
TarH
KH_KhpA-B
KH_2
HDOD
dUTPase
Wzz
ATP-synt_B
DUF4945
UPF0154
SLATT_fungal
Motif
Other DBs
NCBI-ProteinID:
XAU06944
LinkDB
All DBs
Position
complement(1409714..1411282)
Genome browser
AA seq
522 aa
AA seq
DB search
MLTIVLLGALTAIIGGVVGFFISKKVSSANFEIYVEQARSKAKAIESEAELLLHKANLKS
QEIELEARKEYESVKDRVKRDMQDRSDELQRKENEFNRYKESETQKLKNENLALSSERLK
LKRNEKSLEIVKHDYESRIDDVIRVLEGASGMTRTEAKTLLLQKVEESSRADIAHIVRKY
ENEAKAEGQRKANFILAQATTRFAGDFASERLVNNIYLESDELKGRIIGREGRNIKALEM
VLGVDIIIDDTPNTIVVSSFNLYRRAIATKTIELLVEDGRIQPARIEDIYQKVCDEFEDK
ILQEGEDIVAKMGLPPMNPELMRLIGRLRYRASYGQNALAHTLEVAHLAGIMAAEMGGDP
LLAKRAGLLHDIGKSLTHDVDGNHVDLGVEVCTRYNESEVVINAIYAHHGHEEIKSVECG
AVCAADALSAARPGARREVLESFLKRVSLVEEIASRHNGVKQSYAINAGRELRVIVNATL
INDDESVLLAKEIAKEIEEKVQYPGEIKVNVIRETRATVYAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgctaactatcgtactgttaggggctttaacagccatcataggcggggtagtaggtttt
ttcatttctaaaaaagtttcaagtgctaattttgaaatatatgtagaacaggcaagatct
aaagcaaaagctatagagagtgaagccgaactacttttacataaagcgaatttaaaatct
caagagattgagttagaagctagaaaagagtacgagagtgtaaaagaccgtgtaaagcgg
gatatgcaggatcgctctgatgagctgcaaagaaaagagaatgagtttaaccgctacaaa
gagagcgagactcaaaagttaaaaaatgaaaatttagctttatctagtgaaagattgaaa
ttaaaaagaaatgagaaatctctagaaatagtaaaacatgattatgaatcacgtatagac
gatgtcataagagttttagaaggtgcttcggggatgacaagaaccgaagccaaaactctt
ctgcttcaaaaagtagaagagagttcacgtgcggatatcgctcatattgtaagaaagtat
gagaatgaagcaaaagcggaagggcagagaaaggctaattttatattggctcaagccact
acgcgttttgcgggtgattttgcaagtgagagactggtaaacaatatctatcttgaaagt
gatgagctaaaaggccgcatcatcggtagagagggtagaaatattaaagcgctagagatg
gtgctcggtgtcgatatcatcatcgatgatacgccgaacactatcgtcgtaagcagcttt
aatctttaccgcagagcgatcgcgacaaaaacgatagaactgcttgtggaagatggtcgt
atccagccagcgcgcatagaggatatctatcaaaaagtgtgcgatgagttcgaagacaag
atccttcaagagggtgaagatatcgtcgcgaagatgggacttcctccgatgaatccggag
ctgatgagactgatcggaagactaagataccgtgcgagttacgggcagaacgctctggct
catacacttgaagttgctcatttggcaggcatcatggccgctgagatgggcggtgatccg
ttactggcaaaaagagcgggtctgcttcacgatatcggtaagtctctgactcacgatgtt
gacgggaatcacgttgatcttggcgtagaggtctgtaccagatacaacgagagtgaggtg
gtcataaacgctatctatgcacaccacggacatgaagagatcaaaagtgtggagtgtggg
gctgtctgtgctgcagatgcactttcagctgcacgtccgggcgcaagacgagaagtttta
gagagcttcttaaaacgtgtgagtctggtcgaagagatcgcttcaagacacaacggcgtc
aaacagtcgtacgcaattaatgcgggtcgtgaactgagagtcatcgtgaatgcaacattg
ataaacgatgatgagtctgtacttttggctaaagagatcgctaaagagatagaggaaaaa
gtccaatatccgggcgagataaaagtaaacgtgatacgcgagacaagagctacggtctac
gcgaagtaa
DBGET
integrated database retrieval system
