Halothiobacillus neapolitanus: Hneap_0004
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Entry
Hneap_0004 CDS
T01104
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hna
Halothiobacillus neapolitanus
Brite
KEGG Orthology (KO) [BR:
hna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hna03032
]
Hneap_0004
03400 DNA repair and recombination proteins [BR:
hna03400
]
Hneap_0004
Enzymes [BR:
hna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Hneap_0004
DNA replication proteins [BR:
hna03032
]
Prokaryotic type
DNA Topoisomerases
Hneap_0004
DNA repair and recombination proteins [BR:
hna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Hneap_0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ACX94870
UniProt:
D0KVU3
LinkDB
All DBs
Position
4029..6482
Genome browser
AA seq
817 aa
AA seq
DB search
MSDNTPNDASQNAGQSSGYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDN
AVDEALAGHCDTVTVTMHADGSVSVSDNGRGIPVDIHAEEGVSAAEVIMTVLHAGGKFDQ
NSYKVSGGLHGVGVSVVNALSDELELDIYRGGHAYHQSYRLGVPQAPLAEVGATEKSGTS
IRFLPSPTIFTDVVFHYDILAKRLRELSFLNSGIRVFLNDEISGRADTFYYEGGIRAFVE
HLNKGKTVIHKNVLSFSGQKDSVLVELALQWNDSYQENLFCYTNNIPQRDGGTHLTGFRT
ALTRTLNDYMERAGILKKAKVSTSGEDWREGLVAVISVKVPDPKFSSQTKEKLVSSEVKS
AVESLTSERLAEFLEENPQEALLITNKIIEAARAREAARRAREMTRRKGALDIAGLPGKL
ADCQEKDPALSEIYLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMLSSAEV
GTLITALGCGIGREDFNPDKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMKELVERGHI
YIAQPPLYKVKKGKQEQYLKDDLALNQYLLQLAVDGAALQVNAEAPLISGPALESMAREY
LVAQAVIDRLSHRYDPAALKAVLHLPPMTAAEIVEDSALFEAWLNRFTESMNQFADAGVN
YSSRFARTEEGLAGIQITRSQHGVSHETFLPAGFFSTADYRVLGELAIQLDGLIGEDARV
LRGEKSAPITHFEQAIDWLMQEGRRGLGIQRYKGLGEMNPDQLWETTMNPETRRLLQVRI
EDAIASDEIFTILMGDLVEPRRDFIEKFALSAVNIDI
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataacaccccaaacgacgcgagccaaaacgctggccaaagctctggttacgac
tcaaccagtataaaagtcctcaaaggactggatgccgttcgtaagcgcccaggcatgtac
atcggcgacacggacgacggcagcggcttgcaccacatggtgttcgaagtggtggataac
gcggtcgatgaggcgttggccgggcactgcgataccgtcaccgtcaccatgcatgccgat
ggctccgtttcggtgtcggataatggccgtggcatcccggtagacatccatgccgaagaa
ggtgtttcggcggcagaagtcatcatgaccgtgctgcacgcgggcggtaagttcgaccag
aacagttacaaggtctccggtggcttgcatggtgtgggcgtttcggtggtgaatgcgctt
tccgacgagttggagctggacatctatcgtggcggccatgcgtaccaccagtcgtaccgt
ctgggtgttccacaagcgccgttggccgaagtgggcgctacggagaaatcgggtacctcc
atccggttcctgcccagccccaccattttcacggatgtcgttttccactacgacattctg
gcaaagcgtctgcgtgaactctcctttctgaattcgggcattcgcgtatttctgaacgac
gagatttcagggcgtgccgacacgttctactacgaaggcggcattcgcgcgtttgtcgag
catctcaacaaaggcaaaaccgttatccacaagaatgttctgagcttctcggggcagaag
gattcggttctggttgagttggccttgcaatggaatgattcgtaccaggaaaacctgttc
tgctacaccaataacattccgcaacgcgatggcggcacgcatttaacaggctttcgcacg
gcgctcacgcggactttgaacgactacatggaacgcgcgggcattcttaaaaaagccaag
gtatccacctcgggtgaagattggcgcgaaggcttggttgcggtcatttccgtgaaggtg
ccggacccgaagttttcctcacaaaccaaagaaaagctggtgtcatctgaggttaaatcg
gcggttgaatcgctgacttctgaacgactggcagagtttctggaagaaaatccgcaagaa
gccctgctcattaccaacaagatcatcgaagcggcccgtgcccgtgaggcagcgcgacgc
gcgcgtgaaatgacgcggcgcaaaggcgcattggatatcgccggcttgcccggcaagctt
gccgattgccaggaaaaggacccggctctgtccgaaatttatctggtggaaggtgactcg
gcgggtggttcggccaagcaaggccgggatcgccgcacacaggcgattttgccgctcaaa
ggtaaaattctgaatgttgaaaaagcccgtttcgacaaaatgctctcgtcggctgaagtc
ggcaccctgatcaccgcgcttggttgcggtattggtcgggaagacttcaacccggacaaa
ctgcgctaccaccgcatcatcatcatgaccgatgcggacgtggacggcagtcacatccgc
accctgctgctgacgttcttctatcggcaaatgaaggagctcgtcgagcgtggacacatt
tatattgcccagccgccgctgtataaggttaaaaaaggtaagcaggagcagtacctcaag
gatgatttggcgctgaaccagtatcttctgcaattggccgttgatggtgccgcgctccaa
gtcaacgcggaagcgccgcttatttctggccctgcgctggagtccatggcgcgtgagtat
ctggttgcgcaggccgtgatcgatcgtctgtcgcatcggtacgatccagctgcactgaag
gccgtgttgcatttgccaccaatgacagcagcggaaattgtcgaagatagcgcgctattc
gaagcctggcttaatcgctttaccgaatccatgaaccagtttgccgacgcgggcgtaaat
tattcatcccggtttgcgcgcacagaggaaggcctcgcggggattcaaatcacgcgaagt
cagcacggtgtttcacatgaaacattcttgcccgctggtttcttctcaaccgctgattat
cgcgtgttgggcgaattggccatccagcttgatggcttgattggtgaagacgcgcgcgta
ttgcgtggcgagaagagcgcgccgatcacccatttcgagcaagctattgactggctgatg
caagaagggcgtcgcggcctcggcattcagcgctacaaaggtctgggcgagatgaacccg
gatcagttgtgggaaaccacgatgaacccggaaacccgtcggctgctgcaagtgcgcatt
gaagatgccattgcctcggatgaaatctttaccattctcatgggcgatctggttgagcct
cgtcgtgatttcatcgagaaattcgccctgtccgccgtcaacatcgatatctga
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