Halothiobacillus neapolitanus: Hneap_0507
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Entry
Hneap_0507 CDS
T01104
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hna
Halothiobacillus neapolitanus
Brite
KEGG Orthology (KO) [BR:
hna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hna03016
]
Hneap_0507
Enzymes [BR:
hna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Hneap_0507
Transfer RNA biogenesis [BR:
hna03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Hneap_0507
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
ACX95362
UniProt:
D0KY39
LinkDB
All DBs
Position
complement(539350..540474)
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AA seq
374 aa
AA seq
DB search
MTITDGFGLAQQPRLIQSTSALHDVCDQIAESTWATIDTEFMRESTYFPQLCLVQIATPD
AIWLIDPLAVPLAPLWHELNRTSSPLVFHAAEQDLELIYLDSGALPQTLRDSQIAAAFLG
LGEQIGYANLVNRLLHVELDKSQSRTNWAQRPLTAEQQHYAADDVRFLRSMYPLLREQLA
TKNRLAWFDEECAALSDPQRFQPQMTGLWRKVRGQQALRAAQRAVLDAITTWREAWAREL
NLPRRWVLSDEQALELAGSRQFRPNLLNPKNARHHLSVEQVDELRATIERAKQLPPEAFP
QWQAYQRTDPETNAILNRMQALVQERSKLMEISPSLLATTDDMLRLIRAPDALNKLTTGW
RCDVIGLPLKSLLD
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatcacggacgggttcgggcttgcgcaacagccccgattaattcaatccacctcg
gcactgcatgacgtttgtgaccagattgccgaatcaacctgggccacaatcgacacggag
ttcatgcgggaatccacctatttcccgcaattatgcttggtgcagatcgccaccccagac
gccatctggctgatcgatccactggccgtgccgttggcacctttatggcatgaactgaat
cgaacgtcttccccactggtcttccatgccgcagagcaggatctggaactgatctatctc
gattccggcgcgctgccgcaaaccttacgagacagccagatcgccgcggcctttttaggg
cttggcgagcaaatcggttacgcaaaccttgttaaccgcctgctgcatgtggaactcgac
aaatcgcaaagccgaacgaattgggctcagcgcccactcacagcagaacagcaacactac
gcggctgatgacgtgcgctttttacgcagcatgtaccccctgcttcgcgagcagttggcc
accaaaaacagactggcatggttcgacgaggaatgcgccgcactcagcgacccccaacgc
ttccagccccagatgaccggtctctggcgcaaggttcgcggtcaacaggcattgcgcgct
gcacaacgagccgtactcgatgcaatcacgacctggcgggaagcatgggctcgcgagctg
aacctgcctcggcgctgggtcttaagtgacgagcaggcgctggaactggccggttcacgt
caattcaggcccaacctgttgaaccctaaaaatgcacggcatcacctgagtgtcgagcag
gtggatgaattacgcgccaccatcgagcgtgccaaacagttgccgccggaagcgttcccc
caatggcaggcataccaacgcaccgaccccgaaacgaacgccattctgaaccgcatgcag
gctttggtgcaggaacgcagcaaactaatggaaatcagtccatcgctactcgccaccacc
gacgatatgctccgcttgatacgcgcacccgatgccttgaacaaactcacaaccggttgg
cgctgcgacgtgatcggtttgccgctaaaatcactactcgattag
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