Halothiobacillus neapolitanus: Hneap_0620
Help
Entry
Hneap_0620 CDS
T01104
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hna
Halothiobacillus neapolitanus
Pathway
hna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hneap_0620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hna03019
]
Hneap_0620
03110 Chaperones and folding catalysts [BR:
hna03110
]
Hneap_0620
03029 Mitochondrial biogenesis [BR:
hna03029
]
Hneap_0620
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hna04147
]
Hneap_0620
Enzymes [BR:
hna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Hneap_0620
Messenger RNA biogenesis [BR:
hna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Hneap_0620
Chaperones and folding catalysts [BR:
hna03110
]
Heat shock proteins
HSP60 / Chaperonin
Hneap_0620
Mitochondrial biogenesis [BR:
hna03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Hneap_0620
Exosome [BR:
hna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Hneap_0620
Exosomal proteins of other body fluids (saliva and urine)
Hneap_0620
Exosomal proteins of breast cancer cells
Hneap_0620
Exosomal proteins of colorectal cancer cells
Hneap_0620
Exosomal proteins of bladder cancer cells
Hneap_0620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
Pho88
Motif
Other DBs
NCBI-ProteinID:
ACX95473
UniProt:
D0KYF0
LinkDB
All DBs
Position
666956..668590
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKEVRFSSSARDRMLRGVNVLADAVKVTLGPKGRNVVIEKSFGAPHVTKDGVTVAREI
ELEDKFENMGAQMVKEVTSQTADIAGDGTTTATVLAAAIVREGVKAVAAGMNPMDLKRGI
DKAVIAAVEELKKLSRPCSDNKEIAQVATISANADESIGKIIAEAMAKVGKDGVITVEEG
SGFENELDVVEGMQFDRGYLSPYFVNNQKTMSAELEDPFILLHDKKITNIRELLPALEGA
AKAGKPLLIVAEDIEGEALATLVINSMRGIVKVAAVKAPGFGDRRKAMLQDLAILTGGQV
ISDEVGLNLEKITLDDLGRAKRIVVSKENTTIIGGAGDKADIDGRVTQIRAQMETTTSDY
DKEKLQERIAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGVVPGGGVALI
RALEAIRGMTGANTDQNTGIAIAMRAMEDPLRQIVFNCGEEPSVVVNQVRSGSGNFGYDA
SNGTFGDMIEMGILDPTKVTRSALQNAASVAGLMITTECMIAELPKADAPAAPGGDMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttcgtttttccagttctgctcgcgaccgcatgttgcgcggcgtg
aatgtattggctgatgccgtcaaggtcaccttgggcccaaaaggccgtaatgtggtcatc
gagaagagtttcggtgccccgcacgtcaccaaagatggtgtcaccgttgcgcgtgagatc
gagctcgaagacaaattcgagaacatgggcgcgcagatggtcaaagaagtgacctcacaa
accgctgatatcgccggtgatggcactacgacagcgactgtgctggctgccgcgattgtg
cgcgaaggcgttaaagccgttgctgcgggcatgaatccgatggacttgaagcgcggtatc
gacaaagccgttattgctgcggtcgaagagttgaagaaactgtcccgtccttgctcggac
aacaaagaaatcgcccaagtagccaccatctctgccaacgctgatgaaagcatcggcaag
atcattgccgaagccatggccaaagtgggcaaagacggcgtgatcaccgtagaagaaggc
tcaggtttcgagaacgagctggacgtggttgaagggatgcagttcgatcgcggttacctc
tctccgtacttcgtcaacaaccagaaaaccatgtctgctgaactcgaagatccgttcatc
ctgttgcacgacaagaaaatcaccaatatccgtgaactgctgccagcacttgaaggcgct
gccaaagcgggcaagcctttgctgatcgttgccgaagacatcgaaggcgaagcgttggcg
actctggtcatcaactccatgcgcggcatcgttaaagtggctgcggttaaggcaccgggc
ttcggcgatcgtcgtaaagccatgctgcaagatctcgcgattctgaccggtggccaggta
atttccgatgaagtcggcctgaaccttgagaagatcacgctggatgacttgggccgtgcc
aagcgcatcgtggtcagcaaagaaaacaccaccatcattggcggtgcgggcgacaaggcg
gatatcgatggtcgcgtaacccaaatccgtgcgcaaatggaaaccaccacttccgattac
gacaaggaaaaactccaagagcgtatcgccaagctggctggcggcgtggctgtcatcaaa
gtgggtgcagcgactgaagttgaaatgaaagagaagaaagatcgcgtggacgatgcactg
cacgctactcgtgctgcggttgaagaaggcgtggttcccggtggtggggttgccttgatt
cgtgccctcgaagccattcgcggcatgaccggtgccaacaccgatcagaacaccggtatc
gcgatcgctatgcgtgcgatggaagatccactgcgccagatcgtgttcaactgtggtgaa
gaaccttcggttgtcgtaaaccaagttcgttcgggttcaggtaacttcggttacgacgcg
tccaacggtacgtttggtgacatgatcgaaatgggtattctggatcccaccaaggttacc
cgttccgcattgcagaacgcggcatccgtagccggtctgatgatcaccactgaatgcatg
attgccgaactgccgaaggctgacgcgccagccgcaccaggtggcgacatgggcggtatg
ggcggcatgatgtaa
DBGET
integrated database retrieval system
