Halothiobacillus neapolitanus: Hneap_1071
Help
Entry
Hneap_1071 CDS
T01104
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
hna
Halothiobacillus neapolitanus
Pathway
hna03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Hneap_1071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hna03400
]
Hneap_1071
Enzymes [BR:
hna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Hneap_1071
DNA repair and recombination proteins [BR:
hna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Hneap_1071
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Hneap_1071
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Hneap_1071
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
DUF2497
DUF7075
Motif
Other DBs
NCBI-ProteinID:
ACX95907
UniProt:
D0KZN4
LinkDB
All DBs
Position
1158967..1160454
Genome browser
AA seq
495 aa
AA seq
DB search
MSFLFYDFETTGSDPRCDRPIQFAALRTNDELEPIDSPLTLYATLSPEVLPHPQAVLVTG
ILPQTLASSGGRPEAEFAALIHAEMMQPGTCAVGFNSLRFDAELLRFMFWRNLRDPYAHE
WKSGNSRWDVLDAARAFRLLRPEGIHWPTDEQGAPTLRLEALTKVNVIAHANAHDALGDV
EATLAFARLMRAQSPKLFEYLLSLRKKAVVADFVDNPERASFVHVSGRISSTLGSASVFA
NLGQVQGINTQRLLWDLRFDPTEVLDDDMETLAARRFLRDADAQDNQHRLPIKLLHLNRA
PVVVPNAILKEGDIVERMQLDLDAVQKNTRTMAQFKREVADKLHAVLAEQMAFASQDAEC
ALYEGFMPNVDRYALDDFNRVFDQAMAAGGSAQDEPVTEALRKLMAQSWQDARLPELVFR
FVARLRPDLLNEDERTQWQSWVDSRLNAAPDQRYMGFAGFFAAIDALMADAAYRDEATLA
LLTQLKAWGETRIRT
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagttttctgttctacgattttgagaccaccggttccgatccgcgttgcgatcgtcca
atacagttcgcagccttgcgaaccaatgacgagcttgagcctatcgattcacccttgacg
ctgtatgccacgctttcgcccgaagtattgccgcatccccaggccgtgttggtcacaggt
attttgcctcaaacgctcgcctcatccggcggtcggcccgaagcggaattcgccgcactc
atccatgccgaaatgatgcaaccaggcacctgcgccgtgggcttcaacagcctgcgtttc
gatgccgaacttttgcgcttcatgttctggcgtaacttgcgcgatccctatgcccatgaa
tggaaatcaggcaatagtcgctgggatgtgctggatgcggcccgggcgtttcgcctgttg
cgacccgaaggcattcactggcccacagacgagcagggcgcgcctaccttgcggctcgag
gcattgaccaaagtcaatgtcattgcccacgccaacgcgcacgatgccttgggtgatgtt
gaagccacacttgccttcgcgcgactgatgcgcgcccagtcgccaaaactgttcgagtac
cttttgagcctgcgcaagaaagccgttgtggccgatttcgtggataacccggagcgtgca
tctttcgtgcatgtctccggacgcatctcctccacgcttggcagtgcgtccgtattcgcc
aaccttggacaagtgcagggcatcaatacgcagcgtctgctttgggatttgagattcgac
cctaccgaggtgcttgatgacgatatggaaacactcgcggcgcggcgttttcttcgagat
gcagatgcacaagataaccagcatcggctgcccatcaagctgttgcatctcaatcgtgcc
ccggtggtggtccccaacgccatcctcaaagaaggggatatcgtcgagcggatgcaactc
gatttagacgcggtacaaaaaaatactcgcaccatggctcaattcaagcgtgaagttgcc
gataaattacatgcggtattggctgagcagatggcatttgcttcacaggatgcggaatgt
gccctgtatgaaggattcatgccgaatgtggatcgatatgcgctggatgatttcaaccgg
gtgtttgatcaggcaatggcagcgggcggcagtgcacaggatgagccggtgaccgaggcc
ctgcgcaagcttatggcgcagtcgtggcaggatgcgcgcttgccggaattggtattcagg
tttgtcgcccgcttgcggcccgatttattgaatgaggacgaacggactcaatggcaaagt
tgggtggattcacgtttgaatgccgcacctgaccagcgttatatgggttttgcgggattt
ttcgcggcaatagatgccttgatggctgatgcggcctatcgagatgaagcgactcttgcg
ctactgactcaactcaaagcctggggagaaacgcgaattcgaacatag
DBGET
integrated database retrieval system
