Halothiobacillus neapolitanus: Hneap_1120
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Entry
Hneap_1120 CDS
T01104
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hna
Halothiobacillus neapolitanus
Pathway
hna03420
Nucleotide excision repair
hna03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Hneap_1120
03430 Mismatch repair
Hneap_1120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hna03400
]
Hneap_1120
Enzymes [BR:
hna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hneap_1120
DNA repair and recombination proteins [BR:
hna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hneap_1120
MMR (mismatch excision repair)
Other MMR factors
Hneap_1120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACX95956
UniProt:
D0KZT3
LinkDB
All DBs
Position
1218603..1220789
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AA seq
728 aa
AA seq
DB search
MTNKILDPLNEAQREAVTSPSLATLVLAGAGSGKTRVLTHRMAWLHDEQGLSLHSMLAVT
FTNKAAGEMRQRLSTLLAPNEASSASSGLGGLWVGTFHSLSNRLLRMHHQEANLPSSFQI
LDSDDQLRLVKRMLREANMDETRWPPRMVAGLINGWKEQGLRARHLATSGDHLNDAIMPV
YQAYEDICQRGGLVDFTELLLRATELLRDHDTLRQHYQRRFRQVLIDEFQDTNSLQYAWA
RLLVGEDNGIFAVGDDDQSIYGWRGAKIEHIHDFARDFSNTHLVRLEQNYRSTGHILDAA
NAIITRNQGRLGKTLWTEGERGQPIRYYLAFNEQDEAYFVTQQIEQAVRDGLPRSECAIL
YRANAQSRAIEEALIRAGLPYRVYGGLRFFDRAEIRDALAYLRLVANRDDDAAFERVINN
PARGLGDKSLQALRDQARTAATSLWQASINLLASGAFPPRASGGLRQFIDLIDSLAVDSA
TQTLSDRVAICIDRSGLREQHKKDRDQERAQSKLENLDELVNAARGFVFDPDESPGMSEL
DAFLSQTSLDAGDAQGEAWEDCVQLMTLHAAKGLEFEMVFLVGMEEGLFPHQMSIDEPGR
LEEERRLCYVGITRAQKVLTLTSTESRRLHGRQMFPMPSRFLGELPGKLIDEIRPRAQQA
FRAQSGLPGKPESTEAGWRIGQAVRHAKFGEGTIIDHEGSGANTRVLVNFGIEGSKWLIL
SYANLVPV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacaaaatcctcgatccactgaacgaagcgcaacgtgaggccgtaaccagcccc
tcgttggccaccctggttcttgccggtgccggctcaggtaaaacccgcgtactgacgcat
cgcatggcgtggcttcatgacgaacaagggctttcgttgcatagcatgttggcggtgacg
ttcacaaacaaggccgcaggtgagatgcgtcagcgattgtccacattgctggccccaaat
gaggctagttcagcgagttctggtctgggtggcttgtgggtcggcacctttcacagcctg
tccaatcgcctgttacggatgcatcatcaggaagccaatctaccgtcctcctttcagatt
ctggactcggacgatcaactccgcctggtcaaaaggatgctgcgtgaagccaacatggat
gagacccgttggccgccgcgcatggtcgcagggctaatcaacggttggaaagagcaaggg
cttcgggcgcgacatctggcgacgagtggggatcacctgaatgatgcgatcatgcctgtc
tatcaggcctatgaagacatctgtcagcgcggcgggttggtcgatttcaccgaattactt
ttgagagccacagagttactgagagatcacgacacgttgcgtcaacattaccaacgccgg
ttcaggcaagttctgatcgatgaatttcaggataccaacagcctgcaatatgcctgggcg
cggcttctggttggcgaagataacggcattttcgccgtgggtgatgacgaccagtccatc
tacggatggcgtggtgcgaaaattgaacatattcatgactttgcccgtgatttctcgaac
acgcatcttgttcggctggagcagaattaccgctcgactgggcatattctcgatgcagcc
aacgccattattacgcgcaatcaggggcgtctgggcaagacgctctggacggaaggcgag
cgggggcagccgattcgctactacctcgctttcaatgagcaggacgaagcctatttcgtg
acccagcaaattgaacaagcggttcgtgatggccttccacggagcgaatgcgccattctc
tatcgagccaacgcacaatcacgcgccattgaggaagccttgatccgcgcaggtttgcca
taccgggtttacggcggtctgcgtttctttgatcgggctgaaatacgcgatgcattggcg
taccttcgcctggtggccaaccgcgacgatgatgcggccttcgagcgggttatcaacaac
ccggcaaggggattgggcgacaagtcccttcaggcgcttcgtgatcaggccagaacggct
gcaacctcattatggcaagcgtcaataaatctgttagcgagtggtgcatttcccccgcgc
gcatcgggtggtttaaggcaattcattgatctgatcgattcacttgccgtcgattcggct
acacaaacgctatccgatcgtgtagccatttgtattgatcgaagcggtctgcgtgagcag
cacaagaaggaccgagatcaagagcgcgcgcaaagcaaactcgaaaacctggatgagctc
gtcaatgcggcgcgtggattcgtttttgatccggacgaatcgccaggcatgagcgaactg
gatgcttttttaagccaaaccagtctcgatgcgggcgatgcgcaaggcgaggcttgggaa
gattgcgtccagttgatgaccttgcacgcggccaaggggctcgagttcgaaatggtcttt
ctggttggtatggaagaagggcttttcccgcaccagatgtcaatcgatgaacccggtcgg
ctcgaagaggaacggcgattgtgttacgtcggcattactcgagcacaaaaggttctgacc
ctcaccagcaccgaatcgcgccgtttgcatgggcgacaaatgttcccgatgccttcgcgt
tttttgggcgaactgcccggaaaattgattgacgaaatccggccacgagcgcaacaggcg
ttccgggcgcaatccggattgcccggcaagccggaatccacggaggcgggctggcgtatc
ggtcaggctgtgcgccatgccaagtttggtgaaggtaccatcatcgatcacgagggatcg
ggcgcgaatacgcgggtgctggttaatttcggcattgagggcagtaaatggctgattttg
agctatgccaatctcgttccggtttaa
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integrated database retrieval system
