Halothiobacillus neapolitanus: Hneap_1131
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Entry
Hneap_1131 CDS
T01104
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hna
Halothiobacillus neapolitanus
Pathway
hna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hneap_1131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hna03019
]
Hneap_1131
Enzymes [BR:
hna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Hneap_1131
Messenger RNA biogenesis [BR:
hna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Hneap_1131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ACX95967
UniProt:
D0KZU4
LinkDB
All DBs
Position
1230944..1232305
Genome browser
AA seq
453 aa
AA seq
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MFPDKPEPTRISPDTHGLVASQISDHALNVLQRLHDQGYAAFLVGGCVRDLLRGMRPKDF
DVVTDAKPEQVRSLFRHARIIGRRFRIVHVIFGHDMIEVTTFRGGDEDGVRRSDQGRILR
DNVFGSIDEDVWRRDFACNALYYNFANAEIVDYVQGWQDIETGHLRIIGNPVTRYQEDPV
RMLRAARFMAKLGFTLTGDSVSAIQECRDLLKSIAPARLFDESIKIFQGGYAWAAFLKLR
ELDLLGYLFPGLDNLLNRDYDRISRLVERVLVGTDERVGHQLPVNPAFMLAGLLWADLSR
RREHWLHQRVDSDVAFALAMDEVIESTVKQVAIPRRLTDLMRVIWALQPTLEQAAQGMSM
GIAMTELKDQQKHLLAHAWFRAALDFLCLRSEIGEVSPDICQFWRQYAPERDMDSGETVP
THLPEDFARHGDPQRRPRRRRPPRHPKNPSTNK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgtttcctgacaaaccagaaccgacccggatttcaccagacacgcacgggcttgtggct
tcacagatcagcgatcacgccctgaatgtattgcagcgcttacacgatcagggctatgcc
gcttttctggtgggcggttgtgtccgggacttgctccgaggcatgagacctaaagatttc
gacgtggtcacggatgcaaagcccgagcaggtgcggtctctattccgccatgcgcgaatt
atcggccgtcgttttcgtattgttcacgtcatctttggccatgacatgattgaagtaacg
acattccgaggtggtgacgaggacggcgttcgccgttcggaccaagggcggattcttcgt
gacaacgtttttggcagcattgatgaagatgtatggcgtcgagattttgcctgtaatgcg
ttgtattacaactttgccaacgctgagattgttgactatgtgcagggttggcaggatatc
gaaaccggccatttgcgcatcatcggcaaccctgtaacgcgttatcaggaagatcccgtc
cgaatgctccgtgcggcgcgtttcatggccaagctcggtttcaccctgaccggagattcc
gtttctgccatccaagaatgccgcgacctgctgaaatccatcgcgccggcccgtttgttc
gatgaaagcatcaagattttccaaggtggatatgcctgggccgccttccttaaattgcgt
gaactagatttgttgggttatctctttccggggctcgataacctgctcaatcgcgactat
gaccgtatctcaagattggtcgagcgcgtacttgtcggcacggatgaacgcgtcggccat
cagctgcctgttaatcctgcgttcatgcttgcgggattgttgtgggccgatttgagccgt
cgacgtgagcactggctgcatcaacgcgtcgactcagacgttgcctttgccttggccatg
gatgaggtcatcgagtcaacggtcaagcaggttgccatccctcgtcgcctgaccgatttg
atgcgcgtgatctgggcactccagccgacactcgaacaagccgcacaggggatgtcgatg
ggcatcgcaatgacggaactcaaagatcagcaaaaacacctgctggcccatgcctggttc
cgtgccgccctcgattttctctgtctgcgcagtgaaataggcgaggtttctcctgacata
tgccagttctggcgacaatacgcacccgagcgcgacatggattcaggcgaaaccgttccg
actcatctgcctgaagattttgcccggcatggcgatccgcagcgccgcccgcgtcggcga
cgtcccccgcgtcatcccaagaacccatccacgaataaataa
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