KEGG   Halothiobacillus neapolitanus: Hneap_1148
Entry
Hneap_1148        CDS       T01104                                 
Name
(GenBank) tRNA pseudouridine synthase D TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
hna  Halothiobacillus neapolitanus
Brite
KEGG Orthology (KO) [BR:hna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hna03016]
    Hneap_1148
Enzymes [BR:hna01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     Hneap_1148
Transfer RNA biogenesis [BR:hna03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Hneap_1148
 Prokaryotic type
    Hneap_1148
SSDB
Motif
Pfam: TruD DUF6614
Other DBs
NCBI-ProteinID: ACX95984
UniProt: D0KZW1
LinkDB
Position
1247515..1248606
AA seq 363 aa
MSANPGPLDQLLYHGAPPILQGQLKQSPSDFRVDEILGFEPDGEGAHGLFLVEKTGITTG
QMLGLLSKLSGVAERDIGFCGMKDKLAVTSQWVSLPLMPSHSLENPPDWIDALPDHVKVL
RWNLHRKKLRRGSHRGNRFTVTIRDVIGHDPELRQRIERLESQGFPNYFAEQRFGHAGSN
YALLEKLGRLSNARSISRADRNWGISTLRAEIFNRVLSDRLSQNTEATAKPGDLARLAGT
NSWFLVVEEELNNTQQRIDTKDIWLTGPLWGEGPSPAFGDIKTEETRIVEEVLTSYGSEN
WSNHLRDWRVEHDRRALMAPITNLQCEEKTEEGSRILNLSFALESGSYATALLREIIDLT
PAD
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgagtgccaaccccgggccactggatcagttgttgtatcacggcgctccgcccattctg
caagggcagttgaaacaatctccatcagacttccgcgtggatgaaatcctcgggtttgaa
ccggacggagaaggtgcccacggtctgtttctggtcgagaaaacgggaatcaccacgggg
cagatgctggggctactgtccaaattatccggtgtggcagaaagagacatcggcttttgc
ggcatgaaggacaaactcgcggtcacatcccagtgggtcagtctgcctttgatgccatcg
cattcattagagaaccctccggattggatcgatgcattacccgatcacgtaaaagtgctt
cgctggaacctgcatcgcaagaagctgcgtcggggtagtcatcggggtaaccgcttcact
gttacgattcgcgatgtcatagggcatgacccagaacttcggcaacgaattgaaaggtta
gagtcgcagggttttcccaattactttgccgagcagcggttcgggcatgcgggaagcaac
tatgccttgctcgaaaagctgggacgattatcgaacgcccgttcaattagtcgcgctgat
cgaaactggggcatatcgacgctcagagctgaaatcttcaaccgggtcttgtccgatcgt
ctgtcccaaaacactgaagccaccgctaaacctggcgatctggcccgtcttgcgggcaca
aatagttggtttttagttgtcgaggaagagttgaacaacacacagcaaagaattgatacc
aaagatatttggcttacggggccgctctggggtgaaggaccgagtcccgcctttggagat
attaagactgaggaaacccgaatcgtagaagaagttttaacgagctacggctcggagaat
tggtcgaatcacctgcgcgactggcgggttgaacatgatcgacgcgctctaatggcaccg
ataaccaatttgcagtgtgaagaaaagacagaggagggcagccgtatcctcaatctgtca
tttgcattggaatcaggaagttatgcgacagctttgcttcgggaaattattgatctgaca
ccggcagattga

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