KEGG   Halothiobacillus neapolitanus: Hneap_1271
Entry
Hneap_1271        CDS       T01104                                 
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
hna  Halothiobacillus neapolitanus
Pathway
hna00550  Peptidoglycan biosynthesis
hna01100  Metabolic pathways
hna01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:hna00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Hneap_1271
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Hneap_1271
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hna01011]
    Hneap_1271
Enzymes [BR:hna01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Hneap_1271
Peptidoglycan biosynthesis and degradation proteins [BR:hna01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   Hneap_1271
SSDB
Motif
Pfam: Transpeptidase PBP_dimer PrgH
Other DBs
NCBI-ProteinID: ACX96107
UniProt: D0L084
LinkDB
Position
complement(1374991..1376874)
AA seq 627 aa
MSIREAIRDAHLNRAHDRRLNDKHFSRQIFRRRVFLAALIALLVFTVLLWRAAFLQVDRH
AHFSEMAENNRTRTLVIPPERGRIFDDGGRVVADNVATYQAQIVPEDTVDLKRELSMLQQ
VLKLDDDTLHDLKERIKFGRSFDPILVKSDLTAVEMAKLAQLQPWLAGVSVESSLKRVYP
YRQLLAHVVGYVGRINVADLKRINADLYQGTQYIGKSGIEREYEDDLHGKPGFKTVEVDA
VGRVVKVLKVVPPVAGKDIHLTLDVPLQGIAAAALGSYSGAVVAQDPATGAIKAMVSRPS
FDPNLFVDGISHKNYQTLLNDPERPLFDRAITATYPPGSTIKPVMALAGLQYGFLDPNKK
FFAGPYFQIPGDKHHYRDWRKWGHGWVDLDQAITQSCDVYFYDLAYRMGIDPMHTFLTEF
GLGRKTGIDLPGESSGLVPSPKWKRKTKNLPWYPGETVIAGIGQGYMLTTVLQLAQTTSI
LAESGKRYRPWLVASNEDKEPSIELKSQSFWNDVRHGMFDVINSPHGTARRIAAPYLIAG
KTGTAQVFTVAQNASYNAKDLAKKLHDHAVFIGFAPYDDPKIAVAVLAEHGGSGSGTAAP
VARRVMDYYLGFEPKKTVKMEFVKHGD
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgagtattcgagaagctattcgtgatgcacatctgaatcgtgcccatgatcgccgcctg
aacgacaagcatttcagtcgacagatttttcgtcgccgagtgttcttggcggcactgatt
gctttattggtgtttactgttctgttgtggcgagccgcctttttgcaggtggatcgtcat
gcccatttttccgagatggcggaaaacaaccgcacacgaacattggtgatcccgcctgag
cggggtcgcatttttgacgatggcggccgcgttgtggccgacaatgtggctacgtatcag
gcgcaaatcgttcctgaagatacggttgatctcaaacgtgaactctcgatgctgcagcag
gtgcttaagctcgatgacgacacgttgcacgatctgaaagaacggatcaaattcggtcgt
tcattcgatccgattctggtcaagtcggatctgacagccgtggaaatggccaagctggcc
cagttgcaaccttggttggccggtgtctccgtggaatccagcttaaagcgggtttatccc
taccggcagcttttggctcatgtggtcggctacgttggtcgaatcaacgtggccgatctc
aaacgaatcaatgcagacttgtatcaggggacgcaatacatcggcaagtccggcatcgag
cgtgaatacgaagatgacttgcacggcaagcccggtttcaagacagttgaagttgatgcc
gtggggcgtgtcgtcaaggtgctcaaagttgtaccaccggttgcaggtaaagatatccac
ctcacgctggatgtgccattacagggtatcgcggcggcggcactcggttcgtacagtggt
gccgtggtggcgcaagacccggcgacgggcgcgatcaaggcgatggtgtcacggccgagt
tttgatcccaacctgtttgtcgatggcatcagtcacaagaactatcagacgctgctgaac
gatcctgagcgccccttgtttgatcgggccatcacggctacctacccaccgggttcgacc
atcaagcccgtcatggccttggcgggcttgcaatatggtttcctcgacccgaacaagaaa
ttcttcgccggtccgtatttccagattcccggtgacaaacaccactatcgtgactggcgc
aaatggggacacggctgggttgatctggatcaagccatcacgcagtcttgtgacgtgtat
ttctatgatctggcctatcgcatgggcatcgatcctatgcatacgttcttgactgagttc
ggtttggggcgaaaaaccgggattgatctgcccggtgagtcgtctggtctggtgccatcg
cccaagtggaagcggaaaaccaagaatttaccctggtatcccggcgagacggttattgcg
ggtatcgggcaggggtatatgctgaccacggtattgcaattggcgcaaaccacatcgatt
cttgccgaatccggaaagcgttatcgcccttggttggtggctagcaatgaagacaaagag
cccagcatagagctcaagagtcaaagcttctggaatgacgtgcgccacggtatgtttgat
gtcatcaacagtccgcacggcacggcaagaaggatagctgccccgtatcttattgccgga
aaaacgggcaccgcccaggttttcaccgtagcgcaaaatgcgagctataacgccaaggat
ctggcgaagaaactccacgatcatgctgtattcatcgggtttgcaccgtatgacgatcct
aagatcgcagtggcagtgctggccgagcatgggggaagcggctcggggacggctgctcct
gtggcccgacgcgtgatggactattacctcgggttcgaacccaaaaagacagtgaagatg
gagttcgtgaaacatggcgactga

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