Halothiobacillus neapolitanus: Hneap_1306
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Entry
Hneap_1306 CDS
T01104
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hna
Halothiobacillus neapolitanus
Brite
KEGG Orthology (KO) [BR:
hna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hna03400
]
Hneap_1306
Enzymes [BR:
hna01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Hneap_1306
DNA repair and recombination proteins [BR:
hna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Hneap_1306
Prokaryotic type
Hneap_1306
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACX96141
UniProt:
D0L0B8
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Position
1412557..1414080
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AA seq
507 aa
AA seq
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MNVVWFKRDLRLSDHTALARAAKQGPVLLLYILEPELWQQPDMSERQFRFLTACLDELKT
VAQDRSIHFVIKVGEAVEVLTSLHQKYAITALWSHQETGNGWTFARDQRVSRWCQYHHIP
WHEPAQHGVVRRLANRSGWAARWYRQMKQPIAELPPVIHSIDEPSDSWPSPADLGWVNAE
TAQIQSGGRSRALGLLHDFLHERGETYARAMSSPVTAFERCSRLSPHLAFGTVSIREVFQ
AVEARKLALMMQPPTERGMWPSALRSFSGRLRWHCHFIQKLEDEPRIEFCNLHPAYEGLR
ESEFNPAFFEAWQAGRTGYPMVDACMRALKATGWLNFRMRAMVMSFASYHLWLHWRQPAL
YLARMFTDYEPGIHYSQAQMQSGTTGINTLRIYNPIKQGIDHDPEGVFIRRWVPELMDLD
RTWIHTPWLAPSPPTNYPRPIVDEVQARKAAAEKIYQLRKTDPMHREWAQKIAEKHASRK
PGRQQSPKTKQPPKAEKPRTQLSLFED
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgtctggttcaaacgggaccttcgtctttccgatcacacggcgttggcgcgt
gcggcaaagcaagggccggtcctgctgctgtacattctggagcccgaattgtggcagcaa
cccgacatgagcgaacgtcagtttcgttttttgacggcctgtctggacgaattgaaaacc
gtggcccaagacagatcgattcatttcgtgattaaagtgggtgaggccgtcgaagtgctt
acctcgcttcatcaaaagtacgccattacggcgttgtggtcgcatcaggaaacaggtaac
ggctggaccttcgctcgagatcaacgcgtttcccggtggtgccaataccatcacattccg
tggcatgagcctgcacaacacggggtcgtccgccgtctggccaatcgatcgggttgggcc
gcccgatggtatcgacagatgaaacagccaatcgccgaactgccgccggtcattcactcg
atagacgaaccatcagactcctggccctccccagccgatctgggttgggtaaatgctgaa
acagcccaaattcaatcgggggggcgcagccgggcgcttggtttgctgcatgattttttg
catgagcgtggtgaaacctacgcgcgcgccatgtcttcacccgtgaccgcctttgagcgt
tgttcccggttatctcctcacttggcctttggcaccgtttctatccgtgaggtttttcaa
gccgttgaggcgcgcaaactggcgttgatgatgcaaccacccaccgagcggggaatgtgg
ccgagtgccctgcgttcattctccgggcgactgcgctggcattgccattttattcagaag
ctcgaagatgagccacgcatcgaattctgcaatctgcatccggcctacgagggcctgcga
gaaagcgaattcaatcctgctttttttgaggcgtggcaagcgggcagaacggggtatccg
atggttgatgcctgcatgcgggccctcaaggccaccggctggctgaattttcgcatgcgt
gccatggtcatgagttttgccagttatcatctttggctgcattggcgacaacccgcgttg
tatctggcgcgaatgtttaccgactacgaaccgggcattcattacagccaagctcagatg
caatcgggcacaacgggcatcaacactctgcgcatttacaacccgatcaagcaaggcatc
gaccatgaccccgaaggggtgtttattcgtcgctgggtgccggaactaatggaccttgat
cggacttggattcacacgccctggcttgccccctcgccaccgactaactaccccaggccg
atcgtcgatgaggttcaggccagaaaggcggccgccgaaaaaatctatcaattgcgcaaa
accgacccaatgcatagagaatgggcgcagaaaatcgccgagaaacacgccagccgaaaa
cccggcagacaacaatctcccaaaaccaagcagccaccgaaagctgaaaaaccccgaact
cagctttcgctttttgaggattga
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