Halothiobacillus neapolitanus: Hneap_1463
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Entry
Hneap_1463 CDS
T01104
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hna
Halothiobacillus neapolitanus
Pathway
hna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hneap_1463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hna03019
]
Hneap_1463
03016 Transfer RNA biogenesis [BR:
hna03016
]
Hneap_1463
Enzymes [BR:
hna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Hneap_1463
Messenger RNA biogenesis [BR:
hna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Hneap_1463
Transfer RNA biogenesis [BR:
hna03016
]
Prokaryotic type
tRNA degradation factors
Hneap_1463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
S1_2
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
DUF6002
Motif
Other DBs
NCBI-ProteinID:
ACX96295
UniProt:
D0L0S2
LinkDB
All DBs
Position
complement(1577267..1579363)
Genome browser
AA seq
698 aa
AA seq
DB search
MPVAVFTEQFDYGRHSVTLTTGEIARQASGAVMVQMGDTVVLVTVVVESAPEPGQDFLPL
TVEYQEKFYAAGRIPGGFFKREGRSTEAETLIARLIDRPLRPLFPKGFYNQVQVIAQVLS
LDPEVPGDIPAMLGASAALALSGLPFDAHLGAARVGYINEAFVLNPAQTEMADSRLELVV
AGTEEAVLMVESEADRLPEATMLDAVMFGHEAAQSAIAAIRRLAANAARPAMAWAPPVEH
PDLEAKIRTAFGDSIAETYQIAEKQQRYLRLNELREEAIAQFADDVAVPAKLVSSLIESL
ESSVVRGRVLDGAARIDGRDTKTIRPITVRTGVLPRVHGSALFTRGETQALVVTTLGSAR
DAQLIDAVVGEYKESFIFHYNFPPYSVGETGRFGAPKRREIGHGNLARRGVKAVIPNPEN
SPYTLRVVSEITESNGSSSMASVCGASLSMMDAGVEIAAPVAGIAMGLIKEGNRFVVLSD
ILGDEDHLGDMDFKVAGTADGVTALQMDIKINGITREIMSQALDQAKGGRLHILGIMNAA
LAAPRKSVAPNAPQFIKFKINPDKIREVIGKGGATIQGITRDTHTQIDISDDGQITITAT
SAEQGEEARRRVEQITVEAEVGKIYEGKVVRITDFGAFVNILPGKDGLLHISQISDERVE
RVTDKLQEGDNVRVLLLELDKQGRMRLTMRGLDAPQTE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtggccgtttttaccgaacaatttgattatggacgtcattctgtcaccttgacc
acgggagaaattgcccgccaggcttctggtgccgtgatggtgcagatgggcgatacggtg
gtactggtgactgttgttgtcgagagcgcaccggagcccgggcaggactttctgccgctg
accgtcgaatatcaggaaaagttttacgcggctggtcgcattcccggtggtttcttcaag
cgggaagggcggtcgaccgaagcggaaaccctgattgcccgattgatcgatcgtccgtta
cgtcccctgtttcccaagggattttataatcaggttcaggtgattgcccaggtgctatca
ctcgatcccgaagtgcccggcgacattcccgccatgctcggtgcttcagcagcgctggcc
ttgtcgggtctgccttttgatgcacatttgggtgcagcacgcgtcggttatatcaatgag
gcgtttgtgttgaatccagcacagaccgaaatggccgattctcggcttgaactggtggtg
gcgggtaccgaagaagccgtgctcatggtcgaatcagaagcagatcgcttgccggaagcc
acgatgctagatgcagtcatgttcggtcatgaggcggcgcagtcggcgattgcggcgatt
cgtcgtctcgctgccaatgcggcacgtcctgccatggcctgggcgcctccggttgagcat
ccggatctggaagccaaaatccgtacggcatttggtgattcgattgccgagacgtatcaa
atcgccgaaaaacagcaacgctacctgcgcttgaatgaattgcgtgaagaagccattgcc
cagtttgcggatgatgttgctgtgccggccaagttggtttcatccctgatcgagtcattg
gaatcatcggttgtgcgcggtcgcgttctggatggcgcggcgcgcatcgatggtcgcgat
accaaaaccatccgcccgattaccgtacgaaccggtgtgctgccccgcgttcacggttcg
gcgctttttacccgcggtgaaacgcaggctttggttgtgacgacgctcgggtcggcacgc
gatgcgcaattgatcgatgcggtggtgggtgagtacaaggagtcatttatcttccattac
aacttcccgccctacagcgtgggtgagaccggccggtttggtgcgcccaaacgacgcgaa
atcggtcacggcaatttggctcgtcgcggggtcaaggccgttataccaaacccggaaaat
tctccgtacacactgcgcgtggtgtcggaaatcaccgagtccaatggctcaagctctatg
gccagcgtgtgtggcgcatccttgtcgatgatggatgccggtgtggaaatcgcggcgccg
gtagccggcatcgcgatgggcctgatcaaggaaggcaatcgctttgttgtgctttccgac
atccttggagatgaagatcatcttggcgatatggatttcaaggttgccggtaccgccgat
ggggttactgccctgcaaatggacatcaagatcaacggaattacccgtgagatcatgagt
caggcgcttgatcaggccaagggtgggcggctgcacattctgggtatcatgaacgcggca
cttgccgcgccgcgcaagagcgttgccccgaacgccccccaattcatcaagttcaagatc
aacccggacaagatccgggaggtgattggcaagggtggagcgacgattcagggcattacc
cgcgatacccatacacagatcgatatttcagacgatggccagatcacgattacggcgaca
tccgccgagcagggcgaggaagcgcgtcgacgcgtcgagcaaatcacggtcgaggccgaa
gttggcaagatttatgagggcaaagtggtgcgaatcaccgatttcggcgcttttgtgaat
atcctgccgggtaaggatggtctgctgcatatctcgcaaatcagtgatgagcgcgtcgaa
cgtgtgaccgacaagcttcaggagggtgataatgttcgcgtacttttgcttgagttggat
aagcaaggtcgtatgcgcctgaccatgagggggctggatgctccgcagacggaataa
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