Halothiobacillus neapolitanus: Hneap_1571
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Entry
Hneap_1571 CDS
T01104
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hna
Halothiobacillus neapolitanus
Brite
KEGG Orthology (KO) [BR:
hna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hna01011
]
Hneap_1571
Enzymes [BR:
hna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Hneap_1571
Peptidoglycan biosynthesis and degradation proteins [BR:
hna01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Hneap_1571
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM3_NFP
Motif
Other DBs
NCBI-ProteinID:
ACX96401
UniProt:
D0L128
LinkDB
All DBs
Position
complement(1708331..1709950)
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AA seq
539 aa
AA seq
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MIHPAMIFMGKWLAGYRAERPQRSMLLRFLILLVLPAFLALSGCANLPQTAGNAPVASSA
FDDGSSSDNVDYSILPAINTPAQSARKAAWMNDGNLWHYIAARFTLPIPNNPRVQQQLAF
YSSHIDYLERVTERAKPYLHMIVADLQANNLPLELALLPIVESAYRPDAVSTSNAAGIWQ
FVRSTGDHFGLRRTVWYDGRRDIKASTDAAMQYFTRLRVMFNDNWPVVIASYNGGEGTLQ
NAITYNQSKGLPTDFWDLTRISKETADYPARLYALVIIFSNPQKYGFHPYPIPNQSVVTE
ITLNKSVNLNKLASLTGVSHDELFNLNPGFDKSITGPETTNLLVPKSLVSQFTTTALEEA
EKSAMNWGRYTLRRGDNFHKLAYRYGCDVDELLKVNRLSSAYARPGETIIVPFGRGKKLL
ASGADQLYTVQSGDSLWGLAHRFDMDLADLKRINGLKATDPIHPGQKLIVAAKQEHLRTD
DMPVKRSGESSGHYVVQKGDTLWNVARRFSTTVKHLIASNRLDSSTPLKPGQVLMIAGN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgatccatcccgctatgattttcatgggcaaatggttggcgggttatcgcgccgaacgg
ccgcagcgaagcatgttgctccgttttctcatcctccttgttctacccgcttttctcgct
ttgagtggttgtgccaatttaccgcaaacagcaggtaatgcgccggtggcgtccagtgcc
tttgacgatggctcttcttcggacaatgtggattacagcattctgcccgccattaacacg
ccagcgcaaagtgcgcgaaaggcggcctggatgaatgatggcaacctctggcactatatc
gcggctcgattcaccctgccgattcccaataaccctcgtgttcagcaacaactggccttt
tattccagccatattgattaccttgagcgtgtcactgaacgtgcaaagccttatttgcat
atgatcgtggcggatttgcaggccaataatctcccgctggaattggccttgttgcccatt
gtggagagtgcgtaccgacctgacgccgtatcaactagcaacgcagcgggtatctggcag
tttgttcggagcacgggggatcattttggtctgcggcgtacggtttggtatgacggcagg
cgagatatcaaggcttcgactgatgccgcaatgcaatattttacgcgtctgcgggtcatg
tttaatgacaattggcccgttgttatcgcctcctacaacggtggtgagggcacgttacaa
aatgcgattacgtacaaccaatccaaggggctgccaaccgatttctgggatttaacccga
atcagcaaagagacggctgattaccccgcacggctctatgcgttggtgattattttcagc
aatccgcagaaatacggtttccacccctatcccattccgaatcagtctgttgtgactgaa
atcacgttgaataagtcggtcaacctgaacaagctggcttcgctgacaggggtgtcgcat
gacgagctttttaatctgaaccccggcttcgataaatcgattaccggaccggaaacgacc
aaccttctggtgcccaagagtttggtatcacaatttacaacgacggcacttgaagaagcc
gagaaatcggccatgaactgggggcgttatacccttcgccgaggcgataattttcataag
ctggcttaccgttacggctgtgacgtggatgaactgctcaaggttaatcgtttgagttcg
gcctatgcccgtcccggagaaacgatcattgttccgttcggccgcggcaagaagctgttg
gccagtggcgcagatcagctctatacggtgcaaagtggggattcattgtggggcttggcc
caccggtttgatatggatcttgccgacttgaagcgcatcaatggcctaaaggccacagat
ccaattcatccgggccagaaattgatcgtggctgcgaaacaagaacatctgcgtacggac
gacatgccggtgaaaagaagtggcgagtcatcggggcactatgtcgttcagaagggagat
accttgtggaatgtggctcggcggttttcgacgaccgtgaaacacctgattgcttccaac
cgacttgattcgtcaactccactcaagcccggtcaggttttgatgattgctggaaactaa
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