Halothiobacillus neapolitanus: Hneap_1688
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Entry
Hneap_1688 CDS
T01104
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hna
Halothiobacillus neapolitanus
Pathway
hna03030
DNA replication
hna03410
Base excision repair
hna03420
Nucleotide excision repair
hna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hneap_1688
03410 Base excision repair
Hneap_1688
03420 Nucleotide excision repair
Hneap_1688
03440 Homologous recombination
Hneap_1688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hna03032
]
Hneap_1688
03400 DNA repair and recombination proteins [BR:
hna03400
]
Hneap_1688
Enzymes [BR:
hna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hneap_1688
DNA replication proteins [BR:
hna03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Hneap_1688
DNA repair and recombination proteins [BR:
hna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Hneap_1688
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hneap_1688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
NYN_YacP
WH_GTF3C1_N
Motif
Other DBs
NCBI-ProteinID:
ACX96513
UniProt:
D0L1E0
LinkDB
All DBs
Position
complement(1815315..1818137)
Genome browser
AA seq
940 aa
AA seq
DB search
MNDLFSSHVALPVEPAEPTVKSKSLILVDGSSFLFRAFHALPPLTAPDGTPTGAIHGVIN
MLQKLRREENPDRMAVVFDAPGPTFRDELYPEYKAQRPPLPDDLRVQIEPVHELVRALGF
PLLCVSGVEADDVIGTLMHQARQNGESVLVATADKDFAQLVTEGIRLVNTMTNTVLDEAA
IEAKYGITAAQFIDYLTLVGDTVDNVPGVPGCGPKTAAKWLNEWQSLDNLMAHADQIKGK
VGESLRAAKEFLPIGRELVTIRTDCDLPIALADLAVEEPDVDAVRALAEKFGLNTLRRQF
SEASSVPAPVSTPSQETRRTSSDDGQLPLSDPPMYETILTDADWQRWLEQIKNADKKTDK
KMDWVAFDTETDSLDLFAGRIVGVSFSIEDNRAAYVPLAHNYPGAPAQLDRDTVLADLKP
WLEDASRTKVMQNAKFDSHMLANHGITLRGVLFDTMLESYVLDSTATRHDMDSLAAKYLG
RSTITFEDIAGKGAKALSFPEIHLEQAGPYAAEDADVTGQLQQCLWPKLSVEPDLRSVYE
TIEQPLIEVLVAMERAGVRVDRGELAIQGKAIGERIAAVEQAAFKEAGREFNLGSTKQLK
ELLFDELKLPVGKKTPKGEPSTDEEALGELVGSHPLPALILDYRGLSKLKSTYIDRLPED
IHTHTGRVHSAFHQAVTATGRLSSSNPNLQNIPIRSEEGRRIRQAFVADPGCKLISADYS
QIELRIMAHLSEDERLCAAFAAGEDIHRATAAEVFGVKEVEVSDNQRRAAKAINFGLIYG
MSAFGLAKQLDVPRGEAQAYIDLYFARYPGVAKYMERMRQQARQMGYVETVFGRRLYLPE
IHSRNGQRRQYAERTAINAPMQGTAADIIKIAMIALHKLLVVPGRARMILQVHDELIFEV
PESDVAEIEPIIRAQMTGAAKLNVPLEVGIGIGRSWAEAH
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctcttttcctcgcacgttgcccttccagtcgagcccgccgaaccgacagtg
aaatccaaatcgctgattctggtggatggtagttcgttcctgttccgtgccttccatgcg
ctgcccccgctgacggcaccggatggcacaccgacgggcgcgattcacggcgtgatcaat
atgttgcagaaacttcggcgagaggaaaatcccgaccgtatggccgtggtgttcgatgcg
cccggcccgacatttcgcgatgaactctatcccgaatacaaagcacaacgcccaccgctg
ccggatgacctgcgcgtgcaaatcgagccggtgcatgagttggtgcgagcattgggtttt
ccgttgttgtgcgtttcgggtgtggaagccgatgatgtgatcgggacactaatgcatcag
gcgcggcagaacggtgaatcggtgctggtcgcgaccgccgacaaggactttgcgcagttg
gtgaccgagggaatacgtctggtgaacaccatgaccaatacggtgctggatgaagcggct
atcgaagcgaaatatggcatcaccgcagctcagttcatcgattacctgacgctggttggg
gatacagtagataacgtgcccggtgtgccgggatgtggcccgaaaacagccgccaaatgg
ctcaatgaatggcaatcgctggataatttgatggcccatgccgatcaaatcaaaggcaag
gtgggcgagtcgctgcgggctgccaaggaatttctgcccatcgggcgtgagctggtgacg
attcgcaccgattgcgacctgcccattgccctggcggatctggctgtagaggaaccggat
gtcgatgcagtccgtgcgctggcggagaagtttggactcaatacgctacgcaggcagttt
tcagaggcgtcttcggttcctgctcccgtttctacaccaagccaggaaactcggcgtact
tcttcggatgatgggcaactgcccctgagcgatccgccgatgtacgaaaccatcctgacg
gatgccgattggcagcgttggctggagcaaatcaaaaacgcggacaagaaaaccgacaag
aagatggattgggtggcttttgacaccgaaaccgattcgctggatttattcgctggccgg
atcgtcggcgtttccttttcgattgaagacaatcgtgcggcctacgtgccgctggcacac
aactatcccggcgcgccggcgcaactggatcgggacacggtgctggccgatctcaaacct
tggcttgaagatgcatcccgaaccaaggtgatgcagaacgccaagttcgacagccacatg
ttggctaatcatggcatcacgctgcgcggcgtgttattcgacaccatgctcgaatcctat
gtgctggattcaaccgccacacggcatgacatggattcgctggcggcaaagtatttgggg
cgctcgaccatcacgtttgaagatattgccggcaagggcgccaaagcactgagcttcccc
gagatacatcttgaacaagcgggcccctatgcggccgaagatgccgatgtaacggggcaa
ttgcagcagtgtttgtggcctaaattgtcggtcgaacccgatttacgctcagtgtacgaa
acaatcgagcagccgctgattgaagtgctggtggccatggagcgcgcgggggtgcgggtg
gatcggggtgagctcgcaattcagggcaaggccatcggtgagcggattgccgcggtggag
caggccgcgttcaaagaagctgggcgcgaattcaatctggggtcgaccaaacagctcaag
gagttgttgttcgatgaactcaaactgcccgtgggcaaaaagacgccaaagggcgagccg
tctaccgacgaagaagcgcttggcgagctggtaggtagccatcccttgcccgcgttgatt
ctcgattaccgcgggctaagcaagctcaaatcaacctatatcgaccgattgcccgaagac
atccacacccacacgggccgtgtccatagcgcttttcatcaagccgtgaccgcgaccggg
cggctttcttcatccaatccgaacctgcagaacattccgattcgcagtgaagaaggccgg
cggatacggcaggcatttgtcgccgatccggggtgcaaactcatttcagcagactactcg
cagatcgaattacgcatcatggcgcatttgtccgaagatgagcgtctatgcgcggccttt
gccgccggagaagatattcaccgtgccacggcggcggaggtgttcggggtcaaggaagtc
gaagtttccgataatcagcgtcgagcggcgaaagcaatcaatttcggtttgatttatggc
atgtccgccttcgggttggccaaacagcttgatgtgccgcgtggtgaggcgcaggcctat
atcgatctctatttcgcccgctatcccggcgtggcgaaatacatggagcgaatgcggcag
caggcgcgccagatgggctacgtggaaaccgtattcggtcgtcgcttatatttgccggag
attcacagccgtaatggccagcgacgccaatatgccgagcgaaccgccatcaacgcgccg
atgcagggtacggcggcggatatcatcaagatagcgatgatcgctttgcataagctgctg
gtggtgcccgggcgagcccggatgattttacaggtgcacgatgaattgatcttcgaggtg
cccgagtccgacgtcgccgagatcgagccgatcatccgcgcacagatgacaggggctgca
aaattgaatgtgccgcttgaagtgggtatcggcatcgggagaagttgggccgaagcgcac
tag
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integrated database retrieval system
