Halothiobacillus neapolitanus: Hneap_2013
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Entry
Hneap_2013 CDS
T01104
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
hna
Halothiobacillus neapolitanus
Pathway
hna02024
Quorum sensing
hna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hneap_2013
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hneap_2013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hna03019
]
Hneap_2013
03036 Chromosome and associated proteins [BR:
hna03036
]
Hneap_2013
Messenger RNA biogenesis [BR:
hna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Hneap_2013
Chromosome and associated proteins [BR:
hna03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Hneap_2013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ACX96835
UniProt:
D0KVK5
LinkDB
All DBs
Position
complement(2158468..2158746)
Genome browser
AA seq
92 aa
AA seq
DB search
MAKAQSLQEPYLNALRREHVPVSIYLRNGIKLQGQIDSFDNFVVLLKNNVSQLVYKHAIS
TIVPTREIHIDFDDEFGGKPASKEEPAGDEAP
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcccaatcactccaagaaccctatctgaatgccttgcgacgcgagcatgtg
cctgtgtccatttacctgcgcaacggtatcaagctccaggggcaaatcgattcgttcgat
aattttgtcgtgctgctcaagaacaatgtgagccaattggtgtacaagcacgcgatcagc
accattgtgcccacccgtgaaattcacatcgattttgacgatgagttcggcggcaaaccc
gcatcaaaagaagagccagcaggagacgaagcaccttaa
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