Hyphomonas neptunium: HNE_0005
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Entry
HNE_0005 CDS
T00397
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hne
Hyphomonas neptunium
Pathway
hne03030
DNA replication
hne03430
Mismatch repair
hne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HNE_0005 (dnaQ)
03430 Mismatch repair
HNE_0005 (dnaQ)
03440 Homologous recombination
HNE_0005 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hne03032
]
HNE_0005 (dnaQ)
03400 DNA repair and recombination proteins [BR:
hne03400
]
HNE_0005 (dnaQ)
Enzymes [BR:
hne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HNE_0005 (dnaQ)
DNA replication proteins [BR:
hne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HNE_0005 (dnaQ)
DNA repair and recombination proteins [BR:
hne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HNE_0005 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
Amidohydro_3
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABI76446
UniProt:
Q0C6A4
LinkDB
All DBs
Position
3104..3802
Genome browser
AA seq
232 aa
AA seq
DB search
MTERVREIAFDTETTGLNPNEGDRIIEIGAVEMINHIPTGKTFRRLINPGMAVSEATIRI
TGITDDHLRDKPPFEHPDIIDAFLEFTGDAIIVAHNASFDRGFLNMELQRCGRDIIPEDR
WVDTVQMARKRYPGAPASLDALCKRFDISLESRTFHGALLDSQLLASVYLELLGGRARAF
SFEPTLGGEGYQRPAARQRPAPLASLVTDAERAAHAELVEKLGADALWKTLP
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacgcgtccgggaaatcgccttcgacaccgagaccacaggcctcaacccgaat
gagggcgacaggatcatcgagatcggcgcggttgagatgatcaatcacatcccgaccggc
aagaccttccggcgcctgatcaatccgggcatggccgtctccgaagccacaattcgcatc
accggcattacggacgaccatcttcgcgacaaaccgcctttcgagcatcccgacattatt
gatgcgtttctggaatttaccggcgacgccatcatcgtggcccacaatgccagctttgac
cgcggcttcctgaatatggaactgcaacgctgcgggcgcgacatcattccggaagaccgc
tgggtcgataccgttcagatggcgcggaaacgctatcccggcgccccggccagcctggac
gcgctctgcaaacggttcgacatttctctggaaagccgcaccttccacggggcgctgctc
gatagtcagctcttggcgagtgtctatctggagctgctgggtggtcgcgcccgcgcgttc
agtttcgaacccacgctgggaggggagggctaccaacgccccgcagcccggcagcgcccg
gcgccgcttgcttctctggtgacagatgcagagcgcgccgcccatgccgagcttgttgaa
aagcttggggcagacgcgctctggaaaaccttgccctga
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