Hyphomonas neptunium: HNE_0112
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Entry
HNE_0112 CDS
T00397
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
hne
Hyphomonas neptunium
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hne03021
]
HNE_0112 (nusA)
03009 Ribosome biogenesis [BR:
hne03009
]
HNE_0112 (nusA)
Transcription machinery [BR:
hne03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HNE_0112 (nusA)
Ribosome biogenesis [BR:
hne03009
]
Prokaryotic type
rRNA transcription factors
HNE_0112 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_1
LktC
Motif
Other DBs
NCBI-ProteinID:
ABI77369
UniProt:
Q0C5Z7
LinkDB
All DBs
Position
99369..101147
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AA seq
592 aa
AA seq
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MSAIGVSANRLEILQIAKAVAEEKSIDQRIVIEAMQEAIEKAAKAKYGQEHDIRAKIDPA
TGEQTLWRIQTVVDDETFEDEAKQLRLSEAKRIDATLVAGSELKEELPPFDFGRVAAQTA
KQVITQKVRDAERERQYNEYKDRVGEIVSGIVKRVEYGHVIVDLGRAEGIIRRNDGIPRE
NFQPNDRVRAYLYKVSREVKGPQIFLSRAAPDFMRKLFAQEVPEVYEGVIQIKACARDPG
SRAKIGVISNDSSIDPVGACVGMRGARVQAVVGELSGEKIDIIPWSFDAATFIVNGLQPA
EVSKVVLDEDERRVEVVVADDQFPLAIGRRGQNVRLASQLTGWQIDLITESADSERYQKE
FQERTDLFMKALDADETLAQLLASEGFESVEEIAFVAPEDFITIEGFDKDVAEELQERAR
EYLDRVATENDAKRRELGVADEVMELEGVTPSFAVKLGEQGVKTVEDVAGLVPDDITGYR
EPGPDGKPVWVEGILKKGEMRKDDANLFVMKARVAAGWIEPEAIEEMLAQQQSTEPAPEL
TEEERALLALGELGNSGNAGSDDDEEALAEELGIDLSELESEGGDDEAASRE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatcggcgtttcagccaaccggcttgaaatcctgcagatcgccaaagcggtc
gccgaggaaaaatcgattgatcagcgcatcgtcattgaggcgatgcaggaggcaatcgag
aaggctgccaaggccaagtacggccaggagcacgacatccgcgccaagatcgatccggcg
acgggcgaacagaccctgtggcgcattcagacggttgtggatgacgagacctttgaagac
gaggccaagcagctgcgtctttccgaagccaagagaatcgatgcgaccctcgtggccggc
agcgagttgaaggaagaacttccgcccttcgacttcggccgcgtagcggcgcagacggcc
aagcaggtgatcacgcagaaagtgcgcgatgccgagcgtgagcgtcagtataatgaatac
aaggaccgtgtcggcgagatcgtctcgggtatcgtcaagcgtgtcgagtatggtcatgtg
atcgtcgatcttggccgcgccgaggggatcatccgccgcaatgacggtatcccgcgcgaa
aacttccagcccaacgaccgcgtccgcgcttacctctacaaggtcagccgcgaagtgaag
ggtccgcagattttcctgtcgcgcgctgcaccggacttcatgcgcaagctgttcgcccag
gaagtgccggaagtttatgaaggcgtgatccagatcaaggcctgcgcccgtgatccgggc
tcgcgcgccaagatcggcgtgatttccaacgactcctcgatcgatccggtcggcgcctgt
gtcggtatgcgcggcgcgcgcgttcaggccgttgtcggtgagctttctggcgagaagatc
gacatcattccgtggagcttcgacgcggcgaccttcatcgtgaacggtcttcagcctgcc
gaagtttccaaggtggtgctggatgaagacgagcgccgggttgaagttgtcgtggcagac
gatcagttcccgctggcaatcggccgccggggccagaacgtgcgtctcgcgtcgcaactg
accggctggcagatcgacctgatcacggagtcggcagattccgagcgctaccagaaagag
ttccaggagcgcaccgacctgttcatgaaagcgctggatgcggacgaaacccttgcccag
ctgctggcttcggaaggctttgagtcggtcgaggagatcgcgttcgtggcgcctgaggac
ttcatcacgattgagggcttcgacaaggatgtggccgaagagctgcaggagcgcgcccgt
gagtatctcgaccgcgttgccaccgaaaacgacgcgaagcgccgggaacttggtgttgct
gacgaggtgatggaacttgaaggcgtcaccccgtccttcgccgtgaagctcggcgagcag
ggggtcaagacggttgaagacgttgcgggtctcgtacccgacgacatcaccggctatcgc
gagcctggcccggatggaaagccggtctgggtcgagggcatcctcaagaaaggcgagatg
cgcaaggacgacgccaacctgttcgtcatgaaggcccgcgtcgctgctggctggatcgaa
ccggaagccattgaagagatgttggcccagcagcagtcgaccgagcctgcaccggagctt
accgaagaggagcgtgcgctcctcgcgctcggcgagctcggcaattcggggaatgctgga
agtgatgatgacgaagaggccctcgccgaagagctcggcattgacctctccgaacttgaa
tcggagggcggtgatgacgaagccgcatcccgagagtga
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