Hyphomonas neptunium: HNE_0117
Help
Entry
HNE_0117 CDS
T00397
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hne
Hyphomonas neptunium
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hne03016
]
HNE_0117 (truB)
Enzymes [BR:
hne01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HNE_0117 (truB)
Transfer RNA biogenesis [BR:
hne03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HNE_0117 (truB)
Prokaryotic type
HNE_0117 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF1672
Motif
Other DBs
NCBI-ProteinID:
ABI78275
UniProt:
Q0C5Z2
LinkDB
All DBs
Position
105695..106636
Genome browser
AA seq
313 aa
AA seq
DB search
MARQRKRKGEPVTGWINLFKPVDMTSTQAVAIIKRLYNAEKVGHGGTLDPLADGILPIAL
GQATKTVQWAMDAHKEYVFTIRWGISTASQDAEAEITATSDVRPERAAIEAALTRYVGTI
QQVPPKYSAIKVAGERAYDLVREGEAFELEAREVDVHAANVIGMPDADHTVIHVVSGKGF
YVRALARDLAFDLGAEGHISQLRRTRVGAFDAPSAVSIEALEALKEDKPGLMAILKPLHA
VLSGMPQVQVSPHDAANIRQGRSVVLLPHVVEGWRAGRSEEDDRVALALAGDEAIALGEV
RAGQFEPVRVFAG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
ttggcccgccaacgtaagcgcaaaggcgagcccgttacgggctggatcaaccttttcaag
ccggtggacatgacctccacccaggctgttgccatcatcaagcggctctacaatgccgag
aaggtgggccatggcggcacgcttgatccgctggcagacggtatcctgccgattgcgctt
ggccaggcgaccaagacggttcagtgggcgatggacgcgcacaaggaatatgtcttcacc
atccgctggggtatctccactgccagccaggacgccgaagccgagattaccgccacctcg
gatgtgcgcccggagcgggctgccattgaggccgcgttgacccgctatgtcggcaccatc
cagcaggttccacccaaatactcggccatcaaggtggccggagagcgcgcctatgatctg
gtgcgagaaggggaggcgttcgagctggaggcgcgggaagtggatgttcacgcggcgaat
gtgatcgggatgccggacgcggatcatacggtgatccatgtcgtgtccggcaagggattc
tatgtgcgcgccctggcgcgggatctggcctttgatctgggggcggagggccatatcagc
cagctgcgccgcacccgcgtgggcgcctttgatgcgccatcggctgtctccatcgaagcg
ctcgaggcgctgaaggaagacaagcccggcctgatggcgattctcaagccgctgcacgcg
gtactgtcaggcatgccgcaggtgcaggtcagcccgcatgacgcggccaatatccgtcag
ggtcggtcggtcgtccttctgccgcatgtggtggaaggctggcgcgccgggcgcagtgag
gaagacgaccgtgtggcgctggcgcttgcgggcgatgaagccatcgcgctgggcgaagtg
cgcgcgggtcagtttgagccggtgcgcgttttcgcgggctga
DBGET
integrated database retrieval system
