Hyphomonas neptunium: HNE_0191
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Entry
HNE_0191 CDS
T00397
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
hne
Hyphomonas neptunium
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hne03032
]
HNE_0191 (ihfB)
03036 Chromosome and associated proteins [BR:
hne03036
]
HNE_0191 (ihfB)
03400 DNA repair and recombination proteins [BR:
hne03400
]
HNE_0191 (ihfB)
DNA replication proteins [BR:
hne03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HNE_0191 (ihfB)
Chromosome and associated proteins [BR:
hne03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
HNE_0191 (ihfB)
DNA repair and recombination proteins [BR:
hne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HNE_0191 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF5094
Motif
Other DBs
NCBI-ProteinID:
ABI77198
UniProt:
Q0C5R8
LinkDB
All DBs
Position
complement(177183..177482)
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AA seq
99 aa
AA seq
DB search
MLKSQLIEKLAAENAHLRHEDVEKVVNVILGEIGDALTRGDRVELRGFGAFSVRKRDARK
GRNPRTGEPVKVPAKAVPFFKAGKELRARVNGGNDPEAR
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtcccaactcatagagaagctcgcggctgaaaacgcgcacctgcgtcacgaa
gacgttgaaaaggtcgtgaacgtcatccttggcgagatcggtgacgcgcttacccgcggc
gaccgggttgaactgcgcggcttcggcgcattctcggtgcgcaaacgggatgcccgcaag
ggccgtaatccccgcacgggcgagcctgtgaaagtgccggcgaaagccgtccccttcttc
aaggcgggcaaggaactgcgcgcccgcgtcaatggcggcaacgatcccgaggcgagatag
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integrated database retrieval system
