Hyphomonas neptunium: HNE_0541
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Entry
HNE_0541 CDS
T00397
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hne
Hyphomonas neptunium
Pathway
hne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HNE_0541 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hne03019
]
HNE_0541 (recQ)
03400 DNA repair and recombination proteins [BR:
hne03400
]
HNE_0541 (recQ)
Enzymes [BR:
hne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HNE_0541 (recQ)
Messenger RNA biogenesis [BR:
hne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HNE_0541 (recQ)
DNA repair and recombination proteins [BR:
hne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HNE_0541 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HRDC
RQC
Helicase_C
RecQ_Zn_bind
HHH
HHH_5
ResIII
Ste5
Motif
Other DBs
NCBI-ProteinID:
ABI75953
UniProt:
Q0C4S2
LinkDB
All DBs
Position
535327..537174
Genome browser
AA seq
615 aa
AA seq
DB search
MSSAPTLPDARALLKRVYGYDAFRGLQEDVIRDVLEGRDGLAVLPTGGGKSLCYQIPALL
RDGIGLVVSPLIALMADQVDALKLAGVRAERLDSSMDFNARTAALDAAERGEMDLLYVSP
EGLGTALADRLARMKVSLIAVDEAHCVSQWGHDFRPDYRALGRLKGLFPGVPRLAVTATA
DARTRDDILTQLNLTNPAVHVASFDRPNLILSAEPKESNRTARVVQLVKARTGNGAGASG
IVYAATRNAVEDLADALDKAGVPSLAYHAGLDARVRAERQRRFLLEEGLVMCATVAFGMG
VDKPDVRFVIHADPPKTLEAYWQEVGRGGRDGEPAEGVALFGPADMNRSLQWTYSSDAPD
EVKRVQLTKTRQLFAFLNGDECRRGAVRRYFGEEKVDPCGVCDVCRGEVGERHDATRYAQ
MAVSAVLRCGQRIGRGRLVQHLLGEAKDTFDTDLSTLSTFGIGKELPKQGWNRVFDALMF
EGLIAEGGEAMRPVVIVPDADAAKALFRGDRTVSLREDLTAPRRRTRTKGAARAAVLADL
SARDQAVFDALRLWRTGLAKDRGVPPYVIFHDRTLAEIARERPVTPEALREISGVGEKKA
QAYAGDVARVISGAE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgcccccactcttcctgacgcccgcgcgctgctgaagcgcgtatacggctac
gacgcgttccgcggcctgcaggaagatgtcatccgggatgtgctcgaaggccgcgatggc
ctcgccgtcctgcccaccggcggcggcaagtcgctctgctaccagatccccgcgctgctg
cgcgatggcatcggcctcgtcgtctcgccgctgatcgcgctgatggccgaccaggtcgat
gcgctgaaactcgcgggcgtgcgcgccgaacgcctcgacagctcgatggatttcaatgcc
cgcaccgccgccctggacgcggccgagcgcggcgagatggacctgctctacgtctcgcct
gaaggcctcggcacagccctcgcagatcgcctcgcccggatgaaggtctctcttatagcg
gtcgatgaagcccactgcgtcagccagtggggccatgatttccgcccggattaccgcgcc
ctcggccgcctcaaaggtctcttccccggcgtgccgcgcctggcggttacggcgaccgcc
gacgcacgcacccgcgacgacatcctcactcagctgaacctcacaaaccccgccgtccat
gtcgcgagcttcgaccggcccaacctcatcctctcggccgagcccaaggagagcaaccgc
accgcccgcgtcgttcagcttgtcaaagcccgaaccggaaacggggcaggggccagcggc
atcgtctatgccgccacccgcaacgcggtcgaagatctggccgacgcgctggacaaggcc
ggcgtcccctcgctcgcctatcatgccgggctcgacgcccgtgtgcgcgccgaacgccag
cggaggttcctgctggaagaaggcctggtgatgtgcgccacagttgcgttcggcatgggc
gtcgacaagccggacgtccgcttcgtcatccatgccgatccgcccaagacgctggaagcc
tactggcaggaagtcggccgtggcgggcgcgacggggagcctgccgagggcgtcgccctg
ttcggcccggcagacatgaaccgctccctgcaatggacctattcgagcgatgcgcccgat
gaggtcaaacgcgtccagctcaccaagacgcgccagctgtttgccttcctcaatggcgat
gaatgccgccggggcgccgtccggcgctatttcggcgaggagaaagtcgacccatgcggc
gtctgcgatgtctgccgcggtgaagtgggcgagcgccatgacgccacccgctacgcccag
atggcggtctccgccgtcctgcgttgcggccagcgcatcgggcgcggccgtctcgtccag
cacctgctcggcgaagccaaggacaccttcgataccgatctctccaccctctccaccttc
ggcatcggcaaggaacttcccaaacagggctggaaccgggtgttcgatgcgctgatgttc
gagggcctgatcgccgagggcggcgaagcgatgcgtccggtcgtcatcgtgcccgacgcc
gacgccgccaaggccctcttccggggagaccggaccgtctcgctgcgcgaagaccttacc
gccccgcgccgtcgcacccgcacgaaaggcgccgcccgcgccgccgtgctggccgacctc
tcggcccgcgaccaggcggtgttcgacgcgctgcgtctctggcgcaccggtctcgccaaa
gaccggggcgtgccgccctatgtcatcttccatgaccgcacccttgccgagatcgcccgc
gagcggcccgtgacgcctgaagccctgcgcgagatcagcggtgtcggggagaagaaggcg
caggcttatgcgggggatgttgcgcgggtcatttctggcgctgagtga
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