Hyphomonas neptunium: HNE_0872
Help
Entry
HNE_0872 CDS
T00397
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
hne
Hyphomonas neptunium
Pathway
hne03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HNE_0872 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hne03021
]
HNE_0872 (rpoZ)
03400 DNA repair and recombination proteins [BR:
hne03400
]
HNE_0872 (rpoZ)
Enzymes [BR:
hne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HNE_0872 (rpoZ)
Transcription machinery [BR:
hne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HNE_0872 (rpoZ)
DNA repair and recombination proteins [BR:
hne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HNE_0872 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
PRTase_3
Motif
Other DBs
NCBI-ProteinID:
ABI77886
UniProt:
Q0C3U4
LinkDB
All DBs
Position
893387..893737
Genome browser
AA seq
116 aa
AA seq
DB search
MARVTVEDCIQKVPNRFELVLLAAHRARMIREGSPLTIDRDNDKDPVVSLREIAETSIDL
KVVKEALISNLQDIRPGEENEREADRVALQAAPAATEDDVLRAYQAELESGRDDRL
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgttaccgtagaagactgcatccagaaggttcccaaccgcttcgagctcgta
ctgctcgcagcccatcgtgcacgcatgatccgtgaaggatcgccgctgacgattgaccgg
gacaatgacaaggacccagtcgtttccctgcgtgaaatcgccgagacctcgatcgacctg
aaagtcgtcaaggaagccctcatctccaacctgcaggacatccggcccggcgaagagaat
gagcgtgaagctgaccgtgtcgcccttcaggctgcgcctgcagcgacggaagacgatgtt
ctgcgcgcctatcaggcagaactcgaatccgggcgcgacgaccggctctag
DBGET
integrated database retrieval system
