Hyphomonas neptunium: HNE_1412
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Entry
HNE_1412 CDS
T00397
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hne
Hyphomonas neptunium
Pathway
hne03030
DNA replication
hne03410
Base excision repair
hne03420
Nucleotide excision repair
hne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HNE_1412 (polA)
03410 Base excision repair
HNE_1412 (polA)
03420 Nucleotide excision repair
HNE_1412 (polA)
03440 Homologous recombination
HNE_1412 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hne03032
]
HNE_1412 (polA)
03400 DNA repair and recombination proteins [BR:
hne03400
]
HNE_1412 (polA)
Enzymes [BR:
hne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HNE_1412 (polA)
DNA replication proteins [BR:
hne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HNE_1412 (polA)
DNA repair and recombination proteins [BR:
hne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HNE_1412 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HNE_1412 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABI76880
UniProt:
Q0C2B4
LinkDB
All DBs
Position
complement(1440776..1443565)
Genome browser
AA seq
929 aa
AA seq
DB search
MATAPITQDSHLYLIDASAYVFRAFHALPPLTRASDGLPVGAVAGFCNMLFKLLEDLKGK
ERPTHFACIFDASGDTFRNEIYPLYKANRSDPPEELVPQFPLVRRAAVAFAAHAIEQTGF
EADDLIATYARLAEAKGARVTIVSSDKDLMQLITDKVLMLDPMKNKLLGRDDVIEKFGVG
PEGVVDVQSLSGDSVDNVPGAPGIGIKTAAQLLGEYGTVEALLERAGEIKQPKRRETLIN
FADQVRVSKQLVQLKEDVPVVLPVEELAVQDPDPKVLIGFLEEMEFRTITRRVREQMELE
GAIEAPAPEAQPFDVSAYACIRDLKTLEDWVARATAQGHVAVDTETDSLDSVSGGLVGVS
LALAPGEACYIPLAHVDPEAKGDGDMFGADPPRQIKMAEALKVLKPMLEDPAVLKIGQNI
KYDLSVFAQHKIHVHPIDDTMLISFALNAGIHGHGMDDLSERYLGHKPITFKDVAGTGKA
QKSFAQVALDKATEYAAEDADVTLRLWQALKPRLRTEQVTAVYETLDRPLGPVLAEMEQA
GVKVDRDMLSRLSADFNQRMAALEAEAHEQAGRSFNIGSPKQLGEILFDEMNLPGGKKTK
TGAWVTDGDVLEGLAADGHALPRTIVDWRMLSKLRSTYTEALQAAINKKTGRVHTSYMMA
GAQTGRLSSTDPNLQNIPVRTEEGRKIRQAFIAEEGNVLVSADYSQIELRILAHMADIPA
LKQAFKDGLDIHAMTASEMFGVPIEGMDPMVRRQAKAINFGIIYGISGFGLGRQLGIPSG
EANQYIKTYFERFPGIRQYMDETKEFARATGFVKTAFGRKIHLPDIKSKGPARSFAERQA
INAPIQGSAADIIKRAMIRMPEALAEAGLKAQMLLQVHDELVFECPEKEAEKLIKLVQKT
MAAADGPSLRLSVPLVVEAKAADTWAAAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcgcccatcactcaggacagccacctctaccttatagatgcgagcgcctat
gtgttccgcgccttccatgccctgcccccgctgacgcgcgcctctgatggcctgcccgtg
ggcgcggtggcggggttctgcaacatgctgttcaagctgttggaagacctgaaaggcaag
gaacgcccgacgcattttgcctgcatctttgatgcttcgggtgacacattccggaacgag
atttatcccctctacaaggccaaccggtctgacccgcccgaggagctggtgccgcagttt
ccgctcgtgcgccgcgcagcggtggcgtttgccgcccatgcgatcgagcagacgggcttt
gaggcagacgacctgatcgcgacctatgcgcggctcgccgaagccaagggcgcgcgggtg
accatcgtttcctcagacaaggacctgatgcagctgatcaccgacaaggtgctgatgctg
gacccgatgaagaacaagctgctgggccgggacgatgtgatcgagaagttcggcgtgggg
ccggaaggtgttgtggatgtgcaatccctctccggcgacagcgtggacaatgtgcccggc
gcgcccggcatcggcatcaagacggcggcgcagctgcttggcgaatatggcacggttgag
gccctgctggagcgggcgggcgaaatcaaacagcccaagcggcgcgagacgctgatcaat
tttgccgatcaggtgcgcgtgtccaaacagcttgttcagctcaaggaggatgttccggtt
gttcttcccgtggaggaactggcggtgcaggatcctgatcccaaagtgctgatcggcttt
ctggaggaaatggaattccgcaccatcacccggcgcgtgcgcgagcagatggagctggaa
ggcgccatcgaggcccccgcccccgaggcgcagccgtttgatgtttcggcctatgcctgc
atccgcgacctgaaaacgctggaagactgggtggcgcgcgcgacggcgcagggacatgta
gcggttgatacggagacggacagtctggattcggtatccggcgggctggtgggcgtgtca
ctggcgcttgcccccggcgaagcgtgctacattccgctggcgcatgtggacccggaagcc
aagggcgatggcgatatgtttggcgccgatccgccgcgccagatcaagatggccgaagcg
ctgaaagtgctgaagccaatgctggaagatccggccgttctgaagattggccagaacatt
aaatatgatctcagcgtgtttgcgcagcacaagatccatgtgcatccgattgatgacacg
atgctgatctcgttcgcgctcaacgccggcattcacggccatgggatggacgatctgtcc
gagcgctatcttggccacaagccgattaccttcaaggatgtggcagggaccgggaaggcg
cagaaaagctttgcgcaggtggcgctggacaaggcgacggaatacgcggctgaagacgcg
gatgtgaccctgcgcctctggcaggcgctcaaacctcgcctgcgcaccgagcaggtgacg
gcggtttacgaaacgctggaccgcccgctgggccccgtgctggcagagatggaacaggcg
ggggtcaaggtggaccgggacatgctctcgcgcctctcggcagacttcaaccagcgcatg
gccgcgctggaggccgaggcacatgagcaggccgggcgcagcttcaatatcggctctccg
aagcagcttggcgaaatcctctttgacgagatgaatttgccgggcgggaagaagaccaag
accggcgcctgggtaaccgatggcgatgtgctggagggccttgccgcagacggtcacgcc
ctgccccgcacgattgtcgactggcggatgctgtcgaagctgcgctcaacctataccgag
gcgttgcaggcggcgatcaacaagaagacgggccgcgttcacaccagctatatgatggcg
ggcgcgcagacggggcgactgtcctcgaccgatcccaacctccagaacatcccggtacgg
accgaagaaggccgcaagatacgccaggcgttcatcgccgaggaaggcaatgtgctggtc
tcggccgactattcccagatcgagctgcgcattctggcgcatatggcagatattccggcg
ctgaaacaggcgttcaaggacgggctcgacattcacgcgatgacggcgagcgagatgttc
ggcgtgcccattgaaggcatggacccgatggtgcgccggcaggccaaggcgatcaatttc
ggcatcatctatggcatctccggctttgggcttggccgccagctgggcattccttcgggc
gaggcgaaccagtatatcaagacctatttcgagcgcttccccggcattcgtcagtatatg
gacgaaactaaggagtttgcgcgcgcgacgggctttgtgaagacggctttcgggcggaag
atccatttgcccgacatcaagagcaagggcccggcgcgctcctttgccgagcgccaggcg
atcaacgcgccgatccagggctcagcggcggacatcatcaagcgcgcgatgatccggatg
ccggaggcgttggcagaggcgggactgaaggctcagatgctgctgcaggtgcatgatgaa
cttgtcttcgaatgcccggagaaagaggccgagaagctgatcaagctggtgcagaagacg
atggcggcggccgatgggccgtcgctgaggctctccgtgccgctggtggtggaggccaag
gcggcggatacttgggcggcggcgcactag
DBGET
integrated database retrieval system
