Hyphomonas neptunium: HNE_1798
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Entry
HNE_1798 CDS
T00397
Name
(GenBank) deoxyribodipyrimidine photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hne
Hyphomonas neptunium
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hne03400
]
HNE_1798
Enzymes [BR:
hne01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HNE_1798
DNA repair and recombination proteins [BR:
hne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HNE_1798
Prokaryotic type
HNE_1798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABI75705
UniProt:
Q0C191
LinkDB
All DBs
Position
complement(1843380..1844837)
Genome browser
AA seq
485 aa
AA seq
DB search
MSSASPAILWFREDLRLTDNPALNAAVNSGRPLICVYLRETGAGAPREMGGASRWWLNKS
LASLGASLEAIGGKLTLRTGPAEKIIPALVEETGAAAVFWNRRYGLPERETDAAIKKTLK
DNGVECQSFNGRLLMEPWDLKTGSGGWYKVFTPFWRALQAQYKPPAFIPSPKKIAGASAE
TENLKDWGLHPEKPDWSGGIAAAWEPGEVGAQKRLDAFLDGPVSDYVGTRNLPGVSTGTS
RLSPHLRFGEIGPAQIWRAVRARLEAQQADEDSARVFLSEIAWREFSYTLLYYNPALATE
NYNSNFNQMAWRKDDSGFAAWSRGQTGYPIVDAGMRELWHTGWMHNRVRMIVASFLTKHL
LLPWQQGEQWFWDTLVDADPAANPASWQWTAGSGADAAPYFRVFNPISQGQKFDEDGAYV
RHWCPELAGLPDKYLHAPFEADAQTLKRARVMLGTDYPEPIIDHPVGRQRALDAYKAMKE
EQTAE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcctcgcccgcaattctatggttccgagaagatctgcgcctgacggacaat
cctgcgctcaacgctgcggtcaatagtgggcggcccctgatatgcgtctatcttcgggaa
accggagccggggcgccgcgggaaatgggcggggcaagccgttggtggctgaacaagagc
ctcgcatcgcttggcgcttcgctggaagccattggtggcaagctcacactcagaaccggg
cctgcggagaaaatcatccccgcgctcgttgaagagacaggcgcagcggccgttttctgg
aatcggcgatatggcttgccagaacgggaaacagacgcagccatcaagaaaacgctgaag
gacaatggcgtcgagtgccagagcttcaacggccgccttctcatggagccgtgggacctg
aagaccggtagcggcggttggtacaaggtattcacccccttctggagggcgcttcaggcg
cagtataagccgcccgcattcatcccctcccccaagaagattgcaggggcatcggctgaa
actgaaaacctcaaggactggggccttcatccggagaagccggactggtccggcggcatt
gcagcagcttgggagcccggcgaagtgggcgcgcaaaaacggctcgacgcgtttctggat
ggccccgtcagcgattatgtgggcacgcgcaatcttcccggtgtgtcgacaggcacctca
aggctatcaccacatctgcgctttggtgaaataggtccggcacagatatggcgcgcagtc
cgagcgcgcctcgaagcgcaacaggcagacgaagattctgcccgtgtcttcctgtcagag
atcgcgtggcgggaattttcttacacgctgctttattacaatccggcgttggctaccgaa
aactacaatagcaatttcaatcagatggcctggcgcaaggacgattccggattcgcagca
tggtcgcgcggacagaccggatatcccattgttgacgctggcatgcgcgaactttggcat
accggctggatgcacaaccgtgtcaggatgattgttgcatcgtttctgaccaaacacctt
ctcctcccttggcagcagggtgagcaatggttctgggatacgttggtggatgccgacccg
gctgccaatccggcgagctggcagtggacggcgggtagcggcgcagatgctgccccttac
ttccgggtgttcaatccaatttcacagggacagaaatttgatgaggacggcgcctatgtg
cgccattggtgcccggaacttgccggattgccagacaagtaccttcatgcgcctttcgaa
gccgatgcgcagaccctgaaacgtgcacgcgtcatgctgggcacggactatcccgaaccg
ataatcgaccaccctgtaggccggcagcgcgcactggatgcctataaggccatgaaagag
gaacagaccgccgaatga
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