Hyphomonas neptunium: HNE_2060
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Entry
HNE_2060 CDS
T00397
Symbol
glyA
Name
(GenBank) serine hydroxymethyl transferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hne
Hyphomonas neptunium
Pathway
hne00260
Glycine, serine and threonine metabolism
hne00460
Cyanoamino acid metabolism
hne00630
Glyoxylate and dicarboxylate metabolism
hne00670
One carbon pool by folate
hne00680
Methane metabolism
hne01100
Metabolic pathways
hne01110
Biosynthesis of secondary metabolites
hne01120
Microbial metabolism in diverse environments
hne01200
Carbon metabolism
hne01230
Biosynthesis of amino acids
hne01240
Biosynthesis of cofactors
hne04981
Folate transport and metabolism
Module
hne_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HNE_2060 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HNE_2060 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HNE_2060 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HNE_2060 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HNE_2060 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HNE_2060 (glyA)
Enzymes [BR:
hne01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HNE_2060 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ABI77613
UniProt:
Q0C0I5
LinkDB
All DBs
Position
complement(2133424..2134731)
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AA seq
435 aa
AA seq
DB search
MADSAHVPETLAGGFFSVGLAERDPELAAAINQEATRQQHQIELIASENIVSRAVLEAQG
SILTNKYAEGYPGKRYYGGCEFVDIAEELAIERAKKLFNCGFANVQPNSGSQANQGVFQA
VLKPGDTILGMSLAAGGHLTHGAKPNQSGKWFNAVQYGVRPEDHLIDFDEVERLARAHRP
QMIIAGGSAYPRQIDFKRFREIADDVGAIFLVDMAHFAGLVAGGAHPNPLDHCHIATTTT
HKTLRGPRGGMILTNDEALAKKINSAIFPGIQGGPLMHVIAGKAVAFGEALMPEFKTYVE
QVVSNARAMAAACRTAGLDVVSDGTDTHLALIDLRPKGVTGRDAEAALERAYITCNKNGI
PFDPAPPTVTSGIRVGSPAGTTRGFREEEFIQIGTWIGEIVDALANGNSDAVEARVREEV
KALTARFPIYEGLGG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcagattcggcgcatgttccagaaacgctggccgggggctttttctccgttggtctt
gcagagcgcgaccccgagctggccgctgcgatcaaccaggaagccacccgccagcagcac
cagatcgagctgatcgcctcggagaacatcgtctcccgcgccgtgctcgaagcccaaggc
tcgatcctcaccaacaaatacgccgaaggctatcccggcaaacgctactatggcggctgc
gaattcgtcgacatcgctgaggaactcgcgatcgagcgcgccaagaagctgttcaattgc
ggctttgccaacgtccagccaaactccggcagccaggccaaccagggcgtcttccaggcg
gtcctgaagcccggcgacaccatcctcggcatgagcctcgccgccggtggccacctcacc
cacggcgccaagccaaaccagtccggaaaatggttcaacgctgtccagtatggcgtgcgc
ccggaagaccacctgatcgactttgatgaggttgagcgccttgcccgcgcccaccgcccg
cagatgatcatcgccggtggctctgcctatccgcgccagattgacttcaaacgcttccgc
gagattgccgatgatgtcggcgccatcttcctggtcgacatggcccactttgctggtctc
gtcgccggcggcgcccatcccaacccgctcgaccattgccacattgccaccaccacgacg
cacaagacccttcggggcccgcgcggcggcatgatcctcaccaatgacgaagctctcgcc
aagaagatcaactcggccatcttccccggcatccagggcggtcccctaatgcatgtcatc
gccggcaaggcggtcgcctttggcgaggcgctgatgccggaattcaagacctatgttgag
caggtcgtctccaacgcccgcgccatggccgcagcctgccgcacggcgggcctcgatgtc
gtctccgatggcaccgacacccacctcgcgctgattgacctgcgccccaaaggcgtcacc
ggccgcgacgccgaagccgctctcgagcgcgcctacatcacctgcaataagaacggcatc
ccgttcgatcccgccccgccgacggtcacctcgggcatccgggtcggctcgcctgcgggc
accacgcgcggcttccgcgaggaagagttcatccagatcggcacctggatcggcgagatc
gtagacgctctggccaatggcaacagcgacgcggttgaagcccgcgtccgcgaagaggtg
aaggcgctcacggcgcgtttccccatctatgaggggctggggggctga
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