Hyphomonas neptunium: HNE_2258
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Entry
HNE_2258 CDS
T00397
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hne
Hyphomonas neptunium
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hne03016
]
HNE_2258 (rnd)
Enzymes [BR:
hne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HNE_2258 (rnd)
Transfer RNA biogenesis [BR:
hne03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HNE_2258 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ABI75932
UniProt:
Q0BZZ0
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All DBs
Position
2360145..2361311
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AA seq
388 aa
AA seq
DB search
MTDNTLTPITEQSALEDLCGALSESDFVCVDTEFHRETTYWPELCLIQASAPGVEGLIDP
RAEDLDIRPFLDLIASDRQLKVFHAARQDIEIFNRLIGHPPGPIFDTQVAAMALGFGDSI
SYDNLIQRVLRKHIDKSSQFTDWMRRPLSQKQLVYALGDVTHLRDAYLKMRDELEKAGRM
NWVREEMAELEDPATYDTDPMNAWQRLKLRMPKKDYAAIVVAVAAWRERTAQELDKPRRR
ILKDDAIQEIAAQKPRSEEDFNQLRAVPNGFIRSKHGQGLVDAIKEALANPDAFAPELTR
PVQNAQIPAGAPELLKVLLKHVSDENNVVPRLIANSSDIDRIARGETSEDIAAMTGWRYD
MFGQKAIALLSGKLAVSFNGGQVRLFDV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaacaccctgacccccatcacagagcagtccgcgctcgaagatctgtgcggc
gcgctctccgaatccgactttgtctgcgtggacaccgagttccaccgggagacgacctat
tggcctgagctgtgcctgatccaggcgtctgcgccgggcgtggagggtctgatagacccc
agggccgaggatctcgacattcgtcctttcctcgatctgatcgcctctgaccggcagctg
aaagtgtttcacgccgcccggcaggacatcgagattttcaatcgcctgatcggccatccg
ccgggtccgatctttgatacccaggtcgcggccatggcgctcggctttggcgattcgata
tcctacgacaatctgatccagcgcgttctgcgcaagcatatcgacaaatccagccagttt
accgactggatgcgccgcccgctcagccagaaacagctcgtctatgccctcggcgatgtc
acccatctgcgcgatgcctatctgaaaatgcgcgatgagctggaaaaagccggccgcatg
aactgggtgcgcgaggagatggccgagcttgaagatccggccacttacgacaccgacccc
atgaatgcctggcagcgcctgaagctgcgcatgcccaagaaagactatgccgccatcgtg
gtcgccgtcgccgcctggcgcgagcgcacggcgcaggagctggacaagccgcgccggcgc
atcctcaaggatgatgccatccaggaaatcgccgcccagaagccgcgcagcgaggaagac
ttcaaccagctgcgcgcggtgcccaacggcttcatccgctccaagcacgggcaaggcctg
gtcgacgccatcaaggaagcgctggccaatccggacgcctttgccccggagctgacgcgt
cccgtgcagaatgcccagatcccggccggggcgccagagctgctcaaggtgctcctgaag
cacgtctcggacgaaaacaatgtcgtcccgcgcctgatcgccaattccagtgacatcgac
cggattgcgcgcggggagaccagcgaagacatcgcggcgatgaccggctggcgctacgac
atgttcggacagaaagcgattgcgctgctctccggcaagctggccgtgtccttcaatggc
ggacaggtgcgcctgttcgacgtttag
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