KEGG   Hyphomonas neptunium: HNE_2539
Entry
HNE_2539          CDS       T00397                                 
Name
(GenBank) type I restriction-modification system, R subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hne  Hyphomonas neptunium
Brite
KEGG Orthology (KO) [BR:hne00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hne02048]
    HNE_2539
Enzymes [BR:hne01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HNE_2539
Prokaryotic defense system [BR:hne02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HNE_2539
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N Helicase_C DUF4145 SNF2-rel_dom HSDR_N_2 ADIP
Other DBs
NCBI-ProteinID: ABI75921
UniProt: Q0BZ61
LinkDB
Position
complement(2689150..2692554)
AA seq 1134 aa
MTQFAFLQTEFPEVFALARKAEMSATTDARGACFHARLALETAVKWMYAHDRNLRSPYDT
ALSALIHEGTFRALVGNALVTKARIIKDYGNAAAHETRTIPPGNAIISVRELFHFSYWLV
RTYARGNKPDAGLTFDQNALPRAVQVEASTLAKLQALAKERESTAKAHEDAESARIQSEA
DARARDAEIARLQAEIAAIKQANAATQDTHDYNEEETRDAFIDLLLREAGWPLDQKRDRE
FPVTGMPNTKGEGFVDYVLWGDDGIPLAVIEAKRTRRDARVGQQQAKLYADCLEKQFGIR
PLIFYTNGYEHWLWDDERYPPRAVHGFLKKDELELWRQRKTARRMLSTTSIDGEIVERYY
QTRAIRRVGEVFEKDHQRKALLVMATGSGKTRTVIALIDQLMRANWCKRMLFLADRVALV
RQAHNNFKKHLPSAPSANLIQAHDPQKNNHHAARVCLSTYPTMMNLIDEMENGQRRFGPG
HFDLIVIDEAHRSIYRKYRSIFDYFDSLLVGLTATPRDEIDRDTYSLFELERGVPTDSYD
LDQAVADRFLVPPRAISVPLRFVREGIKYDDLSDEEKTKWDALEWEGKLPPGDVDANAVN
KWLFNTDTVDKVLKHLMTYGLKVASGDRLGKTIIFAKNHEHAKFICERFDANYPHLKGHF
ARVVDYQTEYAQSLIDDFSVPERAPHIAISVDMLDTGIDVPEVVNLVFFKIVRSKTKFWQ
MIGRGTRLSPDLFGPGQHKSEFYIFDFCQNFEFFNQNPKVTEGALGRSLSQRLFATRVEI
ASALQGLPQDERGDGLDKLDTDTRRRLLDEVTSMSLENFLVRAKRRAVETFQQPEAWIDL
SADDRETLINEIAGLPTALIDDDVAAKQFDMLVLNGQLALLCGKASFARCKEKVMAIAAK
LEALGNVPMVAAVMTLILEAQTDDFWQDMDAWSLEQMRRRLRDLIKLIEGEDRVLVYTDF
SDEIGEATIVTIPSASIGTDKARFQMKVQEFLRRHLDHISVQKLRRNEQLTQQDLSELER
ILVEQAGATDSDLEEVRAFGGLGLFVRSLVGLEREAAKAAFSEFLANRNLNANQIEFVNL
IIEHLTERGAMDPRRLYESPFTDFDDQGISGIFAQNDVQLIVHLLTEVGRRAAA
NT seq 3405 nt   +upstreamnt  +downstreamnt
atgacccagttcgccttcctccagaccgagtttcccgaggtcttcgccttagcgaggaag
gcggagatgtctgcgaccacagacgcgcgcggggcatgcttccatgcgcgccttgcactg
gagacggcggtcaagtggatgtacgcccacgatcgcaaccttcgctctccctacgacacc
gcgctctccgcactgatccatgaaggcactttccgggccttggttggcaacgctctcgtc
accaaagcgcgcatcatcaaggactacggcaacgccgctgcgcacgagacacgcaccata
ccgcccggcaacgccatcatctccgtgcgcgaactgttccatttcagctattggctggtg
cgtacctatgcgcgcgggaataagcctgatgcagggctgaccttcgaccagaacgcgttg
ccccgagccgtccaagtcgaggcctctaccctcgccaagttgcaagctctagcgaaggag
cgtgagagcaccgcaaaggcgcatgaggatgcggaatctgcacgcatccaaagcgaagca
gacgcaagagcacgcgatgcggagatcgcacggcttcaagccgagatcgccgccatcaaa
caggccaatgccgcgacgcaagacacccatgactacaatgaagaggaaacccgcgacgca
ttcatcgacttgctcttgcgcgaagcgggctggccgctcgatcagaagcgggacagagag
tttcccgtcaccggcatgcccaacacaaaaggggaggggtttgtcgattacgtgctctgg
ggtgatgacggtataccgctcgccgtcatcgaagcaaagcgcactcgccgagatgcgcgc
gtcggccagcagcaggccaagctttacgcggattgcttggagaagcagtttggcatccgc
cccctgatattttacacgaacggatatgagcactggctctgggatgatgaacgctacccg
ccgcgcgccgtgcatgggtttctgaagaaagacgagctggaactgtggcggcagcgaaag
accgctcgccgcatgctatcgacgaccagcatcgatggcgaaatcgtcgagcgctattac
cagacccgcgccatcaggcgtgtcggtgaagtgttcgaaaaagatcatcagcgcaaagcg
ctgttggttatggcaaccggcagcggcaagacccgaacggttatcgcgctgatcgatcag
ttgatgcgcgccaattggtgcaaacgcatgctattcctcgccgatcgcgttgccctcgtc
cggcaagcacacaataatttcaaaaaacacctgccttctgcgccaagcgccaacttgata
caggcgcacgatccacagaagaacaaccatcacgcggcccgcgtgtgtctttcgacctat
cccacgatgatgaatctcattgacgagatggagaacggacagcgtcgtttcggccctggc
catttcgatctgatcgtcatcgatgaggcgcaccggtctatctatcggaagtatcgatcg
atctttgactatttcgacagcttgcttgtcggtctcacagccacgccgcgcgacgaaatc
gatcgcgatacctactcactcttcgagctggagcgcggtgttccgactgactcatacgat
ctggatcaggccgttgccgatcgctttctggtgccaccgcgcgcgatttctgtcccgttg
cgtttcgtgcgggagggcatcaagtatgacgacctctccgatgaggaaaagacgaagtgg
gacgcgctggaatgggagggcaagcttccccctggcgatgtcgatgcgaacgcggtcaat
aaatggctctttaacactgacacggtcgacaaggtgctcaagcatctaatgacctacggc
ctaaaggtcgcgagcggcgatcggctgggtaagacgatcatctttgcgaagaaccatgag
catgccaagttcatctgcgagcggttcgatgcaaactatccgcatctgaagggccatttt
gcccgcgttgtcgattatcagacagaatatgcgcagtcgttaatcgatgacttttcggtg
ccagaacgcgcgccgcatatcgccatctcagtggacatgctggatactggtattgacgta
ccggaagtggtcaacctcgtttttttcaagatcgttcgttcaaagaccaagttctggcag
atgattgggcgcggaacgcgattgagtcccgatctctttggtccaggacagcacaagtca
gagttctacattttcgatttctgtcagaacttcgaattcttcaaccagaaccctaaggtg
acggaaggcgcacttggacgctctctcagccaaaggctttttgcgacacgtgtagagatc
gcaagcgctctccagggtttgccgcaagacgagcgtggcgatgggctcgataaactcgac
acagacactcgtcgtcgccttctggacgaagtgacaagtatgagccttgagaattttctc
gtgcgcgccaagcggcgcgcggttgagacgttccaacagcccgaggcttggatagaccta
tctgccgacgatcgtgaaactctaatcaatgagatcgctgggctgcccacagctcttatt
gatgacgatgtggcagccaaacagttcgatatgctcgtcttaaacggtcagctcgccttg
ttgtgcggaaaagccagcttcgcgcgatgcaaagagaaggtgatggcgattgccgccaag
cttgaggcattgggtaacgtgccaatggttgccgctgtcatgacattgatcttggaagcg
caaactgatgacttctggcaggatatggacgcttggtctctagagcagatgcgccgccga
ctgcgcgatcttatcaagctcattgaaggggaagatcgcgttctcgtatacacagatttt
tccgacgagataggcgaggcgacgattgtcactatcccgagcgctagcattgggacagac
aaagcccgcttccagatgaaggtccaagaatttctcaggcgccatctcgaccatatttct
gttcagaagcttagacgaaatgaacagctaacgcagcaggatttgagtgaattggaacgc
atcctagtggagcaagctggtgcaacggacagcgacctggaagaggttcgcgctttcggt
ggactcggtctcttcgttcgttcgctagttggtctggagcgtgaagccgctaaagctgca
ttttcagagtttctcgctaatcgaaacttgaatgcaaaccagattgaatttgtgaacctg
atcatcgagcatcttaccgagcggggcgctatggatccgcgtcgcctctatgaaagtcca
ttcacagattttgatgatcaagggatcagtggaatctttgcgcaaaatgacgtgcagctg
attgtgcatctcctgaccgaggttggaaggcgggcggcggcataa

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