Hyphomonas neptunium: HNE_2966
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Entry
HNE_2966 CDS
T00397
Symbol
uvrC
Name
(GenBank) excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
hne
Hyphomonas neptunium
Pathway
hne03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HNE_2966 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hne03400
]
HNE_2966 (uvrC)
DNA repair and recombination proteins [BR:
hne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HNE_2966 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
UVR
HHH_5
GIY-YIG
HHH_2
DUF7508
GIY_YIG_domain
Motif
Other DBs
NCBI-ProteinID:
ABI77052
UniProt:
Q0BY00
LinkDB
All DBs
Position
complement(3122104..3123948)
Genome browser
AA seq
614 aa
AA seq
DB search
MRGVDVIKENLKHLPSRPGVYRMFGEAGEVLYVGKARDLKARVSNYTRMGGHTQRIARMI
SLTRAMEFVVTETETEALLLEASLVKSLKPRFNVLLRDDKSFPYILIRRNHEAPQIKKYR
GSKQDEGDYFGPFANAGAVMRTLDTLQKAFLLRTCEDSVYSARTRPCMLHQIKRCAAPCV
GLVSKEDYTALADEAADFLRGKAGELQKRLASEMEAASEAMEFETAARLRDRIRAIAHVR
STQDVNPDGIEEADVFAIAMDGGVSCVQVFFIRAGQNWGASAHFPRHEKDQTAPEILAAF
LVQFYDKRPPPKLILVSEPPDQADLIEEALALKAGRRIELRRPERGTKRDLLTQAERNAS
EALSRKLAESASQERLLTEVQKVFDLAEAPQRIEVYDNSHIQGTNAVGGMIVAGPEGFRK
QAYRKFNIKDTEITPGDDYGMMREVMRRRFARAMKEKVAGNVSDWPDLVLIDGGLGQLNA
TLETLAELGLTPDDVTLVSIAKGVDRNAGREQFFRPGKAPFKLPENAPVLYYLQRLRDEA
HRWAIGAHRQKRAAEAARSPLDEIEGIGPTRKKALLHHFGSARGVSRAKVADLMEVDGVN
EALAIRIYGHFNSG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcggggtagatgtcatcaaagagaatctgaaacacctgccgtcccggccgggcgtc
taccgtatgttcggtgaggcgggcgaagtgctgtatgtcggtaaggcgcgcgacctgaag
gcccgtgtctccaattacacccggatgggcgggcacacgcagcgcatcgcccggatgatc
tcgctgacccgcgcgatggaattcgtggtcaccgagaccgagaccgaggcgctgctgctg
gaagccagcctcgtcaaatcgctcaagcctcgcttcaacgtgctgctgcgcgacgacaaa
tcgttcccctacatcctgatccggcgcaatcatgaggcgccgcagatcaagaaatatcgc
ggctccaagcaggatgagggggattatttcggccccttcgccaatgcgggcgcggtgatg
cgcaccctcgacacgttgcagaaggcgttcctgctgcgcacctgcgaggatagtgtctat
tcagcgcgcacgcgcccctgcatgctccaccagatcaaacgctgcgctgcgccttgcgtc
ggtctcgtctcgaaggaggattacaccgccctcgctgatgaagcggcggacttcctgcgc
ggcaaggcaggcgagctccagaaacgcctcgcctcggaaatggaagcggcttctgaagcg
atggagttcgagaccgccgcgcgcctgcgcgaccgtatccgcgccatcgcccatgttcgc
tccacccaggacgtgaaccccgacgggatcgaggaagccgacgttttcgccatcgccatg
gacggcggcgtttcctgcgtacaggttttcttcatccgggccggccagaactggggcgcc
agcgcgcactttccccgccacgagaaggaccagacagcgccagagattctcgccgctttc
ctcgtccagttctatgacaagcgcccgccgcccaaactcatcctcgtcagcgagccgccc
gatcaggctgacctgatcgaagaggcgctggcgctgaaagcgggccgccgaatcgagctg
cgccgtcccgagcgtggcaccaagcgcgacctgctcactcaggccgaacgcaatgccagc
gaggcgctctcccgcaagctcgccgaatccgccagccaggagcggttgctcaccgaagtg
caaaaggtcttcgaccttgccgaggcgccgcaacggattgaggtctatgacaactcccac
atccaggggacgaacgcggtcggcggcatgatcgtcgccgggccggagggcttccgcaag
caggcctaccggaagttcaacatcaaggacaccgagatcacgccgggcgatgattacggc
atgatgcgtgaggtgatgcggcggcgctttgcgcgcgctatgaaggagaaagtggccggg
aatgtctcggattggccggatcttgtcctgatcgatggcgggctggggcagttgaatgcc
acgctggaaacactggcggagcttggattgacgccggatgacgtgacgttggtgtccatt
gccaagggcgttgaccgcaatgccgggcgcgagcagtttttccgccccggaaaagcccct
ttcaaattacccgaaaacgcgcctgtgctttactatctccagcgcctacgcgacgaagcc
caccgctgggccatcggcgctcaccgtcagaagcgcgccgctgaagcggcccgttcgccg
ctggacgaaatcgagggcatcggccctacacggaagaaagcactgctccaccatttcggc
tcagcgcgcggtgtttcccgtgccaaggtggccgatctgatggaggtggacggggtaaac
gaggccctcgccatccgcatctatgggcatttcaacagcggctga
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