Hyphomonas neptunium: HNE_3045
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Entry
HNE_3045 CDS
T00397
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
hne
Hyphomonas neptunium
Pathway
hne03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HNE_3045 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hne03400
]
HNE_3045 (uvrB)
DNA repair and recombination proteins [BR:
hne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HNE_3045 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HNE_3045 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_22
AAA_19
Kinesin
UB2H
AAA_5
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABI78354
UniProt:
Q0BXS1
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All DBs
Position
3215337..3217382
Genome browser
AA seq
681 aa
AA seq
DB search
MKLEGGKRFRVAAEYEPAGDQRTAIPELVEGITAGERDQVLLGATGTGKTFTMAKIIEAT
QRPALILAPNKTLAAQLYGEFKSFFPDNSVEYFVSYYDYYQPEAYVPRSDLYIEKESSIN
EAIDRMRHSATRAILERDDVIIVSSVSCLYGIGSVESYTSMTFTLKAGDRIDPKQVTARL
VANQYTRNDVAFGRGAFRVKGDVIDIFPAHYEDRAWKLSFFGDELESITEFDPLTGRTMQ
KLPQVKIYANSHHVTPRPTLNQAIEKIKAELKTTIAHFEKNGKLLEAQRIEQRCTYDLEM
LAATGSCNGIENYSRYLTGRKPGEPPPTLFEYLPENALVFTDESHQTIPQIGAMFKGDFS
RKSTLAEYGFRLPSCIDNRPLKFDEWDAMRPQTVHVSATPGKWEMERTGGVFTEQVIRPT
GLIDPPVEVRPVSNDGANQVDDIMAEAKTAAANGMRTLITTLTKKMAENLTDFLHENGVK
VRYMHSDVDTIERIEIIRDLRLGVFDVLVGINLLREGLDIPECGLVGILDADKEGFLRSE
TSLVQTIGRAARNADAKVILYADRVTGSMQRAMDETSRRREKQMAYNIEHGITPTTIKRA
VSDILSELGEKPSASRSRRNRERGVSEEKPLPLRGETGHNLKAAIASLEKQMREAAANLE
FETAARLRDEVKRLREEDLGI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctggagggcggcaagcgcttccgcgtcgctgccgaatacgagcccgccggcgac
cagcgcaccgccatccccgaactcgtcgaaggcatcaccgccggcgagcgcgaccaggtc
ctcctcggcgccactggcacgggcaagaccttcaccatggccaagatcatcgaggccacc
cagcgccccgcgctcatcctcgcccccaacaagaccctcgccgcccagctctatggcgag
ttcaaatccttcttcccggacaactcggtcgagtatttcgtctcctattacgactactac
cagcccgaagcctatgttccgcgctcggacctttacatcgagaaggaaagctccatcaac
gaggccatcgaccggatgcgccactccgccacccgcgccatcctggagcgtgacgacgtc
atcatcgtctcctccgtctcctgcctctatggcatcggctcagtggaatcctacacctcg
atgaccttcaccctgaaggccggcgaccgcatcgaccccaaacaggtcaccgctcgcctc
gtcgccaaccagtacacccgcaacgatgtcgccttcggccgcggcgccttccgcgtgaag
ggcgacgtcatcgacatcttccccgcccactatgaggaccgcgcctggaagctctccttc
ttcggcgacgagctggaatccatcaccgagttcgaccccctcaccgggcgcacgatgcag
aagctcccccaggtcaagatctacgccaacagccaccacgtcacgccgcgcccgacgctc
aaccaggccatcgagaagatcaaggcggagctgaagaccaccatcgcccatttcgagaag
aacggaaaactcctcgaagcccagcgcatcgagcagcgctgcacctacgacctcgaaatg
ctcgccgccaccggctcctgcaacggcatcgagaactattcccgctacctcaccggccgc
aagcccggcgagccgccccccaccctcttcgaatacctgcccgagaacgccctcgtcttc
accgacgagtcccaccagacgatcccccagatcggcgccatgttcaaaggcgacttctcg
cgcaagtccaccctcgccgaatacggcttccgcctgccttcctgcatcgacaaccgcccc
ctcaaattcgacgaatgggacgccatgcgcccccagacggtccacgtctccgccaccccc
ggcaaatgggaaatggagcgcacgggcggcgtgttcaccgaacaggtcatccgccccacc
ggccttatcgacccacccgtcgaagtccgccccgtctccaatgatggcgccaaccaggtc
gacgacatcatggccgaggccaagaccgccgccgcaaacggcatgcgcacattgatcacc
accctgacgaaaaagatggcggaaaacctgacagacttcctccacgaaaacggggtgaag
gtccgctacatgcactcggacgtcgacaccatcgagcgcatcgagatcatccgcgatctg
cgcctcggcgtgttcgatgtcctcgtcggcatcaacctgctgcgcgaggggctcgacatt
cccgaatgcggcctcgtcggcattctggacgccgacaaggaagggttcctgcgttcagag
acttccctcgtccagaccatcggccgcgccgcacgcaacgccgacgcaaaagtcattctg
tatgcggaccgggtcaccggctccatgcagcgcgccatggacgaaaccagccgccgccgc
gaaaagcagatggcctacaatatcgaacacggcatcacgccgaccacgatcaagcgcgcc
gtgtcagacatcctctccgaactcggcgaaaagccctccgccagccgctcccgccgcaac
cgcgaacgcggcgtcagcgaagaaaagcccttgccacttcggggcgaaaccgggcacaac
ctcaaagctgcaatcgccagcctcgaaaaacagatgcgcgaagccgccgcgaacctcgag
ttcgaaacggccgcccgccttcgggacgaggttaagcggctgcgggaagaggatttgggg
atttag
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integrated database retrieval system
