Hyphomonas neptunium: HNE_3082
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Entry
HNE_3082 CDS
T00397
Name
(GenBank) deoxyribodipyrimidine photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hne
Hyphomonas neptunium
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hne03400
]
HNE_3082
Enzymes [BR:
hne01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HNE_3082
DNA repair and recombination proteins [BR:
hne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HNE_3082
Prokaryotic type
HNE_3082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABI77145
UniProt:
Q0BXN5
LinkDB
All DBs
Position
3256990..3258600
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AA seq
536 aa
AA seq
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MFYICSMSGVHVIWFKRDLRVHDHAALAAAVASGAPILPLYIFEPGYWALPEHSRRQFDF
VRDSLEELDAALKARGTKLVIRMGSAIDVFSALHQKHGIAAIHAHEETGLQWTFDRDRAV
RRWARNAGISLREQPQNGVQRALQSRDGWANQWEAFMRRPRLVAPEALKPSAADSEEWPL
PQDFGLGADDCPQRQKGGRMAAVDCLRSFLESRGRTYQKSMSSPLTAADACSRLSPHLAF
GTVSIREAWQAAQKAQHEHGRSGDTGFAASIGSFISRLQWHCHFIQKLEDQTSIESRNLH
PGYDGLRPEPLAGDPRLAAWIEGRTGFPFLDACMRSLRETGWLNFRMRAMVMGFASHHLW
LDWKQPAEHLAALFTDFEPGIHYPQAQMQSATTGMNTPRIYNPVKQSQDQDPDGAFIRRW
VPELSGLPAEWLHAPWEAPASVRARAGIVLGQTYPMRIVDHMAAAEEARSRIFAVRKRAG
HGAQADALQARHGSKRSGIPFRGQQAARRQAVPRAPEPAQLSFDLHLTPPSQAHAS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
ttgttctatatttgttccatgtctggcgtgcatgtcatatggttcaagcgggatttgcgt
gttcacgatcacgcagccttggcggcggcggtggcgagcggcgcgcctatcctcccgctt
tacatatttgagcccggttattgggcgttgcccgaacattcccgccgtcagttcgatttc
gtccgggactctctggaagaactggacgccgcattgaaagcgcgcgggaccaagctggta
atccgcatggggagcgcgattgatgtgttttccgcgcttcatcagaaacacggtatcgcg
gcgatccatgcccatgaagaaactggcctgcaatggacctttgatcgcgaccgggcggtt
cggcggtgggcgcggaatgccggcatttctctgcgcgaacagcctcagaatggcgttcaa
cgtgccctgcaatcacgcgacggatgggccaatcagtgggaagctttcatgcgccgcccc
agactggtggcccccgaggctttaaaaccgtcggcagcagacagcgaggaatggcctctg
ccgcaggattttggattgggcgcggatgactgccctcaacgccagaagggtggccggatg
gcagccgttgattgcctgcgtagctttcttgaaagccggggccgcacctaccagaaaagc
atgtcgagccccctgacggcggccgatgcctgctcgcgcctgtcgccgcatttggcattt
ggcacggtctcgatcagagaggcctggcaggcagcgcaaaaagcgcagcacgagcatggc
agaagcggcgataccggatttgccgcttcgatcggcagctttatctcccggctgcaatgg
cattgccatttcatccagaagcttgaggatcagacatccatagaatcgcgcaatcttcat
cccggttatgatggcttgcgccctgaacccctggcgggcgatccccggcttgctgcctgg
atcgaggggcgtaccgggtttcctttcctggatgcctgtatgcgctccctcagggagaca
gggtggctgaacttccgcatgcgcgccatggttatggggtttgcgtcacaccatctctgg
ctcgattggaaacaaccggccgaacatctggcggccctgttcaccgattttgagcctggc
attcactatccccaggcacagatgcaatcagcgacgaccggcatgaacacgccccgtatc
tataatcccgtcaaacaatcgcaggaccaggacccggatggggcgttcatacgccgctgg
gttcccgaactttccgggctacccgccgaatggctgcacgccccctgggaagcgcccgct
tcggttcgcgcgcgagccggaatcgttctgggccagacctatccgatgcggattgtggat
catatggcagcggccgaagaggcgcgtagccggatatttgcggtgaggaagcgggccggc
catggggcccaggcagacgcactgcaggcccgccacggaagtaaacgctccggcattccc
tttcgcggccagcaggctgcgcgcaggcaagcggtaccgagggcgccggagccggctcag
ttgagctttgacctccacctgactccgccgtcgcaggcccatgcctcatag
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