Hyphomonas neptunium: HNE_3274
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Entry
HNE_3274 CDS
T00397
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hne
Hyphomonas neptunium
Pathway
hne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HNE_3274 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hne03400
]
HNE_3274 (mutM)
Enzymes [BR:
hne01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HNE_3274 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HNE_3274 (mutM)
DNA repair and recombination proteins [BR:
hne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HNE_3274 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
HVO_2753_ZBP
DUF7573
Motif
Other DBs
NCBI-ProteinID:
ABI77492
UniProt:
Q0BX46
LinkDB
All DBs
Position
3435714..3436607
Genome browser
AA seq
297 aa
AA seq
DB search
MGTYLTCECLSVYAITMPELPEVETVRRGLAPVMEGRRIVKLEQRRADLRFSLPERFAER
LSGARIDRLARQAKFLAAHLSTGEVLVMHLGMTGRFTIGGQMPGEFHYGAGGIAAHDHVV
FHMEGGETVTYNDPRRFGFMELWPAATFLAYPRLMTMGPEPLSNGFSHAYLDEALRGKAA
PIKAALLDQKVIAGLGNIYVCEALFRSGISPKRLSKTIPGQRAARLAPAINAVIAEAIAA
GGSSISDFAATDGALGYFQHRFDVYDREGQACKSCGMEIKRIVQSGRSTFYCPSCQR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgggaacctatcttacctgcgaatgccttagcgtatatgcgataacgatgcctgaatta
cctgaagtcgagacagttcgccgcggacttgcccctgtcatggaggggcggcgcatcgtc
aagctggaacagcgccgggcggacctgcggttttccctgcccgagcgctttgccgagcgg
ctctcgggcgcgcggatcgaccggctcgcccggcaggcgaaatttctcgccgcccacctc
tccaccggggaagtgctggtgatgcatctgggcatgaccgggcggtttacgattggcggg
cagatgccgggggagtttcactatggcgccggcgggatcgcggcgcatgaccatgtggtg
ttccatatggaggggggcgagactgtcacctacaacgacccccgccgctttggcttcatg
gagctctggcctgccgccacattcctggcatacccaaggttaatgacgatggggcctgag
ccgctctcaaacggcttttcccacgcctatctggacgaggcgctgcgcggcaaggcagcg
ccgatcaaggccgcgctgctggaccagaaggtgattgcggggctcggcaacatctatgtc
tgcgaagcgctgttccgctcaggcatctcgcccaagcggctgtcgaaaaccattccgggc
caacgcgctgcccgtctggccccggcgatcaacgcggtgattgccgaagcgattgcggcg
ggcggatcgtcgatttcagactttgccgccacggacggggcgctcggctacttccagcac
cggtttgatgtatatgaccgcgaggggcaggcgtgcaaaagctgcgggatggagatcaag
cggatcgtgcaatcggggcgctcgacgttttattgcccgagctgtcagcgttaa
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