Hyphomonas neptunium: HNE_3450
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Entry
HNE_3450 CDS
T00397
Name
(GenBank) putative alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
hne
Hyphomonas neptunium
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hne03021
]
HNE_3450
Transcription machinery [BR:
hne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HNE_3450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
UCR_14kD
KORA
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ABI76449
UniProt:
Q0BWM1
LinkDB
All DBs
Position
complement(3587521..3588408)
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AA seq
295 aa
AA seq
DB search
MSSAYSTTSPADRQFVKTAMKAPLLDPAHEASLARRWREAEDEAALHELTTAYMRLVISM
AAKFRHYGLPMADLVSEGNVGLMQAAARFEPEREVRFSTYASWWIRSSIQDYVLRNWSIV
RTGTTSAQKSLFFNLRRLRARISDLGDGTMTRENKQWVSTHLGVPLRDVEIMSARLSGSD
RSLNAPLTMDGDAEWQDMIADEGAPPEEAVMRSHDTARRHEWISEAMEALTPRETYIITR
RRLSEEPQTLEALGHELGVSKERVRQIEHQALSKLKRALEQIAGDPETAGIVPDA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagtgcatattcaacgacaagcccggccgaccggcagttcgtgaagactgcgatg
aaggcgccgctgcttgatccggcacatgaggcctcgctggcgcgccgctggcgggaagcg
gaagacgaagccgccttgcacgaactcacgaccgcttacatgcgcctcgtcatttccatg
gcagcgaagttccgtcattacgggctgccgatggcggaccttgtatcggaaggcaatgtc
ggcctgatgcaggctgccgcgcggtttgagccggagcgggaggtgcgtttctcgacctat
gccagctggtggatacgctcctccattcaggactatgtgctgcgcaactggtcaatcgtc
cggaccgggacgacctcggcgcagaaatccctcttcttcaatctgcgccgcctgcgcgcc
cgtatctccgatttgggagacggcacgatgacccgcgagaacaagcaatgggtttccacc
catcttggtgtaccgctgagggatgtcgagatcatgtcagcgcgcctttcggggtcggac
cggtctctcaatgcgcccttgacgatggatggggacgctgagtggcaggacatgatcgct
gatgagggggctccaccagaggaagccgtgatgcgatcgcacgacacagcgcgccgtcac
gagtggatcagtgaggcgatggaggcgctcacccctcgcgagacctacatcatcacacgc
agacgcctgtcggaggagcctcagacactcgaggcgctgggccatgagctgggcgtttcc
aaggaacgggtgcgccagatcgaacatcaggcgctgtccaaactgaagcgcgcgcttgag
cagattgccggcgaccctgaaacggcaggcatcgtccccgatgcgtga
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