KEGG   Hyphomicrobium nitrativorans: W911_02035
Entry
W911_02035        CDS       T02943                                 
Name
(GenBank) Ffh, signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hni  Hyphomicrobium nitrativorans
Pathway
hni02024  Quorum sensing
hni03060  Protein export
hni03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hni00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    W911_02035
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    W911_02035
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    W911_02035
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hni02044]
    W911_02035
Enzymes [BR:hni01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     W911_02035
Secretion system [BR:hni02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   W911_02035
  Eukaryotic Sec-SRP protein
   W911_02035
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA ArsA_ATPase DnaB_C TctA AAA_31 ResIII AAA_33 AAA_22 AAA_19 ATPase AAA_25 AAA_14 Thymidylate_kin AAA_17
Other DBs
NCBI-ProteinID: AHB47457
UniProt: V5SAI9
LinkDB
Position
441626..443188
AA seq 520 aa
MFQSLSDRLSGVFDKLTKRGALTESDVAEAMREVRRSLIEADVALDVVRDFTDRVRAKAI
GQEVLRSVTPGHMVVKIVNDELIRTLGSEAAPIDLHASPPVAILMAGLQGSGKTTTTAKI
AWRLTNRDKKKVLMASLDTRRPAAQEQLRVLGEQTGVATLPIVAGQGPLQIAKRAMEAAR
LGGYDVVILDTAGRTTLDEELMTEVAEVRDATQPHEILLVLDSLTGQDAVNTAKAFDSRL
GITGTVLTRADGDGRGGAALSMRAVTGKPIKLLGTGEKWDALEDFDPERVAGRILGMGDI
VGLVEKAAQTIDVEKAKSIAQKMKKGEFDLEDLSEQLKQMEKIGGMGGVLGMLPGMGKMK
AQLNAANLDDSIVKRQRAIISSMTPKERRHPKVLDAKRKRRIAAGSGTRVEDVNKLVKMH
RQMADMMRAMGKNKGMMARMFGMGGGGGPSEAELADMQNELARLDPKALAQLPDDLKSSL
PKGLPGLGGGVPRLPGLGGGLPGLGGALPKFPGVPGKKKK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgtttcaatcgctttcggaccggctgtcgggcgttttcgacaagcttaccaagcgtggc
gccctcaccgagagcgacgtggcggaagccatgcgcgaggtgcgccgctccctgatcgag
gcggacgtggccctcgacgtggtgcgggacttcacggacagggtgcgggccaaggcgatc
ggccaggaggttctgcgctccgttacgcccggccatatggtcgtcaagatcgttaacgac
gaactgatccggacgctcggttccgaagccgcgccgatcgatctccacgcgagcccgccc
gtcgcgatcctgatggcgggcctgcagggctccggcaagacgacgacgaccgccaagatc
gcctggcgcctgaccaaccgggacaagaaaaaagtcctgatggcgtcgctcgatacgcgc
aggccggccgcgcaagagcagcttcgcgtgctcggcgagcagacgggcgtggcgacgctt
ccgatcgttgctggccaaggcccgctccagatcgcgaagcgggcgatggaggctgcgcgt
ctcggcggttacgacgtcgttatcctcgataccgccggccgcacgacgctcgacgaagaa
ttgatgacggaggtcgcggaggttcgcgacgccacgcagccgcacgagatcctgctcgtt
ctcgacagcttgaccggccaggatgccgtcaacaccgcgaaggcgttcgattcccggctc
ggcatcaccggcaccgtgctgacgcgcgcggacggcgacggccgcggcggtgctgcgctc
tccatgcgcgccgtcaccggcaagccgatcaagctgctcggtaccggcgaaaagtgggat
gcgctcgaagacttcgatcccgagcgcgttgccggacgcatcctcggcatgggcgatatc
gtgggcctcgtcgagaaggccgcgcagacgatcgacgtcgaaaaggcgaagtcgatcgcc
cagaagatgaagaagggcgagttcgacctcgaagacttgtccgagcagctcaagcagatg
gaaaagatcggcggcatgggcggcgtgctcgggatgctgcccggcatgggcaaaatgaaa
gcccagctcaacgccgccaatctcgacgacagcatcgtgaagcgtcagcgcgcgatcata
tcctcgatgacgcccaaggagcggcggcatccgaaagtgctcgacgccaagcgcaagcgg
cgtattgcggccggttccggcacacgcgtcgaggatgtgaacaagctcgttaaaatgcat
cgccagatggccgacatgatgcgcgccatgggcaagaacaaaggcatgatggcgcggatg
ttcgggatgggcggcggtggcgggccttccgaagccgagcttgccgacatgcaaaacgaa
ctcgcgaggctcgatccgaaggcgctcgcgcagctgcccgacgatctcaagagttctctt
ccgaaaggattacctggactgggcggcggcgttccgcggcttcccggtcttggcggcgga
ctgccgggtctcggcggtgcgctcccgaagttccccggcgtgccgggaaagaaaaagaag
tga

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