Hyphomicrobium nitrativorans: W911_02325
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Entry
W911_02325 CDS
T02943
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
hni
Hyphomicrobium nitrativorans
Brite
KEGG Orthology (KO) [BR:
hni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hni03032
]
W911_02325
03036 Chromosome and associated proteins [BR:
hni03036
]
W911_02325
03400 DNA repair and recombination proteins [BR:
hni03400
]
W911_02325
DNA replication proteins [BR:
hni03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
W911_02325
Chromosome and associated proteins [BR:
hni03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
W911_02325
DNA repair and recombination proteins [BR:
hni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
W911_02325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DOCK_N
Motif
Other DBs
NCBI-ProteinID:
AHB47505
UniProt:
V5SBU6
LinkDB
All DBs
Position
512602..513024
Genome browser
AA seq
140 aa
AA seq
DB search
MILFAEETLMATKTVTKAAPKTKAKAKAPAKAKPATKTAAAKTTAAKATNTLTLRHIGVA
LSETHDLPKKQANAVLEDMVALITKHLKKGDRIRIGGLGILQVRKRPARMGRNPATGETI
KIKASKKVAFRAAKDLKEQI
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
ttgattcttttcgctgaggaaacactcatggctaccaagactgtcactaaagccgcgccg
aagactaaggcgaaggcaaaggctccggctaaagccaagcctgcaacgaagaccgctgcg
gccaagacgacggccgcgaaggcaacgaacaccctcacgcttcgccatatcggcgtcgcg
ctttccgagacgcacgaccttccgaagaagcaggccaacgccgtgcttgaggatatggtt
gcgttgatcaccaagcacctcaagaagggcgaccgcatccgcattggcggcctcggcatc
cttcaggtgcgcaagcgtccggctcgcatgggccgcaacccggcgacgggcgagaccatc
aagatcaaggcgagcaagaaggttgccttccgcgccgccaaggatctcaaagagcagata
taa
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integrated database retrieval system
