Hyphomicrobium nitrativorans: W911_04490
Help
Entry
W911_04490 CDS
T02943
Name
(GenBank) polyketide synthase
Organism
hni
Hyphomicrobium nitrativorans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
PS-DH
Thioesterase
CurL-like_PKS_C
KAsynt_C_assoc
PP-binding
PKS_DH_N
Beta-ketacyl_N
adh_short
RhiE-like_linker
adh_short_C2
Thiolase_N
Pyr_redox
Abhydrolase_1
Pyr_redox_2
Epimerase
Motif
Other DBs
NCBI-ProteinID:
AHB47828
UniProt:
V5SBD6
LinkDB
All DBs
Position
complement(942552..949043)
Genome browser
AA seq
2163 aa
AA seq
DB search
MSDSGSSVSQSDIAIIGMALRVPGANSVEEYWQNLRGGVESIETRTPEQLIEAGENPEKI
RHKNYVPRTAALSGFAEFDAEFFGFSPKEAAIMDPQHRQFLECAWEALEDSTRPPARING
PVGVFAGCGMGSYFYFNVLSHRSLVENVGLFLLRHTGNDKDFLATRASYLFDLHGPSINV
QTACSTSLVAVHQACQSLLNGECEMALAGGVTIELPHRRGYVYQEGEILSTDGHCRSFDH
RASGTVFGSGAGVVVLRRLADAIADGDPIHAVIKGSAVNNDGASKAGYLAPSVTGQAEAI
VEAQAIAGVDAESIGYVECHGTGTYLGDPIEIEALTQAFRQTTNKTGFCRVGSVKSNIGH
LDTAAGVASLIKAVLAVKNGEIPPTLGFEKPNPAIPFATSPFVVADRLTDWPSGPAPRRA
GVNSLGVGGTNAHIIVEEPPRLKATEARTEAGPHVLVLTAKNRNALDDGGRRLARHLDAN
PDALLQDVAHTLLDGRRHFEHRRVVAVSNRADAIGILAEPDKHRVFTHTPVEGTADAVFM
FPGGGAQYPHMARSLYRDEAAFRRIVDEGLSYLPAAASQEIREIWLATDGPTPGAAERFL
RPSLQLPAILIVEVAIARLWMSWGVKPTALIGHSMGENAAACIAGVLSYERAVNLVRLRG
ELFEEISPGGMLSVALGAAALKLRLPDDLDLASVNAPELCVVSGANSALEAFREALAADD
IDASRIPIDIAAHSRMLAPILERFEAFLKATPLSTPRIPIVSNLTGTWLTADEAQDATYW
TRHLRSTVRFGDGLGLLAQTQSRVFIEVGPGRVLGSLAKAQGIPANQVINSLPHADETLD
DRLFFLTAVGRAWAVGLDVPLDRLTIDTAPRRVNLPPYAFQHETYFLERIAPSSAAESEA
SPVKLPDMANWGWEPVWKQASPDVRIDAADTPASWLIFLDGSPLGDTLAHRLRELGHEVA
TVSLGDTFGVVAPGNYVLCPEHGREGYDALLNHLAAERGLPQRIVHLWLLTHDESFRPGS
SFFHRNIERGFLSLLWLGQALSEIGATEPLQITAVTNGMQRVGNEAVRYPEKATLLGPAQ
VLPREMPNVSVRVVDLPLSPDARLGLLARERARLLRYLANASADNDPEDVVFSQLWDDLL
AANGSEIAAYRRGRRWVLGFAPLTLDDASQGETAFRERGVYLITGGLGELATACAEDLAQ
RFKARLVLIGRTELPDREEWRDYLAAFGTRDKIGRAIAAIERIEAAGGEVMIAKADITNS
EAMRTVVTDAKARFGAIHGVLHAAGVVKDDLIALKNPTDIEDVFAPKIHGTLVLADVLAD
EPLDVMVLFSSTSTDTAPAGQVDYVAANAFLNAFAETRSGAPGRTLALHWGIWKNVGLAA
RAIAAAEHQDAAPKVEPARTPLFDRRLSSARSDWLESRLASTRQWVLDEHRLKSGHAIWP
GTGYIEFAAEALAEHDIGGPFEIEDLTFLRPLHVPDETPLVARVTLAKDGDGYMFAVESE
RGIEGATTPLRHAEARVSAFVGPRPARIDIAQVLASCSQTTHAAETGLALKSAQDGNLKF
GPRWQVLRSVALGQGEAIARLALDDAFKTDLDDGFLVHPALLDIATGYAMDLIPNYDPGA
GLWVPMTYGRIRVFGTLPASLWSHARLNTARELGADYATFDVTVTDDAGQVLVAVNGFTV
RRLPANIDLAASLSTEAEGAAATRAPAGGTELSPALQRLAAQVDQGILPEDGFEALLRAV
GTGKSQVIVSSIDLAALRRAAARVDGIEAASTTFERPNLGVDFIEPTTDVEKTLAGFWSE
LLGVKAIGTQDNFFDLGGHSLIAVRLFRMIKAAYAVDFPISVLFEAPTIAQCAALIEETS
PKAGEPTGKSATVTALDRPKLRHVVRMDAGKETRRTPFFLAAGMFGNILNLRHLAVHIGT
DRPVYGLQARGIYGGEAPHETFEETARDYLAEIRTVQPEGPYLIGGFSGGGLVAYEMAQQ
LRKAGEKTALVVLLDTPYPADVPLSIQDRILMKLQDMEREGVAFFGNWARRRIAWERRRM
EARRRPESPKSAEQFHNEELEAAFRRALSRYRGQPYGEPVLLMRPKQDVRYRVTGNRALN
EERALLLPDNGWAPYAASLSVQEVPGDHDSMVLEPHVRVMASRLREALASADRGPSSRPI
AAE
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcggcagcagcgtgtcgcagagcgacatcgccattatcgggatggccttg
cgcgttcccggcgcaaattctgtcgaggaatactggcagaaccttcgcggtggcgtggaa
tcgatcgagactcgcacacccgagcaactcatcgaagccggggaaaatcccgagaaaatc
cgccataaaaactacgtgccgcgcacggcagctctttcaggcttcgcggaattcgatgcc
gaattcttcgggttcagcccgaaggaagccgctatcatggacccgcagcaccgccagttt
ctcgaatgcgcctgggaagcgttggaagattcgacgcgtccgcccgcacgcatcaacggg
cccgtcggggtattcgccggttgcggaatgggaagctacttctatttcaacgttttgagc
caccgctcgctcgttgagaacgtcgggctgtttcttctccgccatacgggcaatgacaaa
gacttcctcgcgacgcgcgcgtcctatctgttcgacctgcatgggccgagcatcaacgtt
cagacggcctgctccacctcgctcgtcgcggttcaccaggcctgccagagccttctcaac
ggcgagtgcgagatggcgctcgcgggcggcgtcaccatcgagctgccccaccggcgcggc
tacgtctaccaggaaggcgagatcctctcgaccgacggccactgccgttcgttcgaccat
cgcgcatccgggacggtgttcggaagcggtgccggcgtcgtcgtgctgcgccgcctcgcc
gatgcgattgcggacggcgatcccatccatgcggtcatcaagggaagcgccgtcaacaac
gacggtgccagcaaggcaggctacctcgcgccgagcgtcaccggccaggcggaagccatc
gtcgaggcgcaagcgatagctggcgtcgatgcggaatcgattggctacgtggaatgccac
ggcaccggcacgtatctcggagatccgatcgaaatcgaggcgctgacgcaggcgtttcgc
caaaccaccaacaaaacgggcttctgccgcgtcgggtcggtgaaatccaacatcggccat
ctcgataccgccgcaggtgtcgcgagcctgatcaaggccgtgctcgccgtaaagaatggc
gagattccgcctacgctcggcttcgaaaaacccaatccggcaatccccttcgcgacgagc
ccgttcgtggttgccgaccgcctgacggattggccgtccggcccggcaccgcgacgcgcc
ggcgtcaactcgctcggcgtcggcggcaccaacgcccatatcatcgtggaggagccgcca
aggctcaaggccacggaagcgcggaccgaagccggcccgcacgtgttggtcctcaccgcc
aaaaaccgtaacgccctcgacgacggcggacggcggcttgcccggcacctcgatgcgaac
ccggacgcgctgctccaggacgtagcccatacgctgctcgacgggcggcgtcattttgag
caccggcgcgtcgtcgccgtgtccaaccgtgccgacgcgatcggcattctcgccgagcct
gataagcaccgcgtgttcacgcatacgccggtcgagggcacggcggatgccgtcttcatg
ttcccgggcggcggggcgcagtatccgcacatggcccgcagcctctacagggacgaagcg
gctttccgccggatcgtagatgaaggactttcttatctccctgcggcagccagccaggag
atccgcgagatatggctcgcaaccgacggacctacacccggtgccgcggagcgctttctg
cgaccgtcgctgcagcttcccgcaatcctcatcgtcgaggtggcgatagcacgtctttgg
atgagctggggcgtgaagcccactgcgctgatcggccattccatgggcgagaacgctgcg
gcttgcatcgcgggcgtgctgagctatgagcgcgctgtcaatctcgtccgtcttcgcggc
gagctgttcgaagagatctcccccggcgggatgttgagcgtcgcgctcggagccgcggcc
ctgaaactgcgcctccctgacgatctcgacctcgcctcggtgaacgcgccggaactctgc
gtcgtctcgggggcgaattcagcgctcgaagccttccgtgaagcacttgccgccgacgac
atcgacgcaagccgcatccccatcgacatcgcagcccactcgcggatgctggcgccgatc
ctcgaacgtttcgaagccttcctcaaggcgacgccgctttcgacccctcgcattcccatc
gtctccaacctgaccggcacctggctcaccgcggacgaagcacaggacgccacctactgg
acgcgccatctcagatctaccgtgcggttcggcgacgggctcggcctgctcgcgcaaacg
cagtcacgagtgttcatcgaggttggccccgggcgtgtgcttggctcgcttgccaaggcg
cagggcattcccgccaatcaggtcatcaacagcctgccgcacgccgacgagacgctcgac
gatcgcctctttttcctgacggcggtgggtcgcgcatgggccgtgggcctcgacgttccg
ctcgaccggctgaccatcgacaccgcgccgcgccgggtgaacctgcccccctacgcgttc
cagcatgagacctactttctcgaacgcatcgcgccgtcgagtgcggcagagagcgaggcc
tcgcccgtcaaactgccggatatggcgaactggggatgggaaccggtctggaagcaggca
tcgcccgacgtcaggatcgacgccgctgacacgcccgcatcatggctgatcttcctcgac
ggatcgcccctcggagataccctcgcccaccgcttgcgcgaactcgggcatgaggtcgcg
accgtctcgctcggcgacacattcggcgtcgtcgcgcccggcaattacgtcctgtgcccc
gagcacggacgcgagggatacgacgcgcttctgaaccacctcgccgccgagcgcggcctg
ccgcagcggatcgtccatctttggcttctgactcacgacgagagcttccggcccggatcg
agtttcttccatcgcaatatcgagcgcggattcctcagcctcctttggcttggacaagcg
ttgagcgagatcggcgcaaccgagccgctccaaatcacggccgtaaccaacggcatgcag
cgtgtcgggaacgaggcggtacgctatccggagaaagcgacactgctcggacccgcccag
gtgctaccgcgcgaaatgcccaacgtttcggtgcgcgtcgtggaccttccgctttcgcca
gacgcgcgcctcggcctcttggcgcgcgaaagagcgcgtcttctacggtatctcgccaac
gcaagcgcggataacgatcccgaggatgtcgttttttcccagctttgggacgatctgctt
gcagccaacggcagcgagatcgccgcctatcgccggggccgccgctgggttttaggtttc
gcgccgctcacgctcgacgacgcgtcgcaaggcgagacagccttccgcgagcgcggcgtc
tatttgatcaccggaggccttggagaactggcaaccgcgtgcgccgaagacttggcgcag
cgcttcaaggcgcgcctggttctgattggcagaaccgaattgcctgaccgcgaagaatgg
cgtgactatcttgccgcgttcggcacgcgcgacaagatcggccgggccatcgccgccatc
gaacgcatcgaggctgccggcggcgaggtcatgatcgcgaaggccgacatcaccaattcc
gaagctatgcgcaccgtcgtaaccgatgccaaagcgcgcttcggcgccattcatggagtg
ctgcacgcggccggagtggtgaaggacgacctgatcgcactcaagaaccccacggacatc
gaggacgtgttcgcgcccaagatccacggcacgctcgtgttggccgacgtgctcgccgat
gagccactcgacgtcatggtgctcttctcctcgacgagcaccgatacggcacccgccggc
caagtggattacgtggccgcaaacgcattcctgaacgctttcgcagagacccgttcgggc
gcgccagggcgcacgctcgcgctgcattggggcatctggaaaaatgtcgggctcgcggcc
cgcgccatcgccgcggccgagcaccaggatgcggcgccgaaggtggaaccggcccgcacg
ccgctgttcgacaggcgcctcagcagcgcccgcagcgactggctcgaatcccgcctcgcc
agcacgcgccagtgggtgctcgacgagcaccgcctgaagtcgggccatgccatctggcca
ggcacgggctacatcgagttcgcagccgaagcgctcgcagagcacgacatcggcggaccg
tttgagatcgaagacctcacattcctgcgtccgctacacgttccggacgaaacgcccctg
gtcgcgcgcgtcacacttgccaaagacggcgacggctacatgttcgccgtcgaaagcgag
cgtggtatcgagggcgcgacaacgccgctacggcacgcggaagccagggtcagcgcgttt
gtcggcccgcgccctgcccgcatcgacattgcgcaagtgctcgcctcttgcagccagaca
actcacgcagcagagacgggtctcgcactcaaatccgcacaggacggcaatctcaagttc
ggccctcgctggcaggtcttgcgctccgtcgcgctcggccagggcgaagcgatcgcacgg
ctcgcgctcgacgacgcgttcaagaccgatctcgacgacggcttcctcgtccaccctgcg
ctgctcgacatcgcgaccggctacgccatggatttgatcccaaactacgatcccggcgcc
ggcctttgggtgccgatgacctacggccgcatccgggtgtttgggacgctgccggcttcg
ctgtggagccacgcgcgcctcaacacggcgcgggaactcggcgcggattatgccaccttc
gacgtcaccgtcacggacgatgccggccaggtcctggtcgccgtgaacggcttcaccgtg
cggcgccttcccgcaaacatcgaccttgcagcttcgctttccaccgaggcggagggggcc
gcagcgacgcgcgcgccagccggcggaacggaactcagccctgcgcttcagcgcctcgca
gcccaagtcgaccaaggcatcctgccggaagacggcttcgaagcgttgctccgcgccgtg
gggaccggaaaatcgcaggtcatcgtaagctccatcgatctcgcggcccttcggcgtgct
gctgcgcgcgtcgatgggatcgaggcggcctcgaccaccttcgagcggcccaacctcggc
gtcgacttcatcgagcctacgaccgatgtcgaaaagacgctggccggtttctggtccgag
ctccttggcgtgaaagcaatcggcacgcaggacaacttcttcgatctcggcgggcattct
ctgatcgcagtgcgcctgttccgcatgatcaaggccgcctacgccgtcgacttcccgatc
tctgtgctgttcgaggcgccgacgatcgctcaatgtgccgcgttgatcgaagaaacctcg
ccgaaggccggcgaacccacgggcaaaagtgcgacagtcacggcgctcgatcggcccaag
ctccggcatgtcgtgcggatggacgcgggaaaggagacccgccgcaccccgttcttcctt
gccgccggtatgttcggcaacattctcaacctgcgccatctcgcggtccatatcggcacc
gatcgtcccgtctacggcctccaagcccgcggcatctacggcggcgaggcgccgcacgaa
accttcgaggagacggcgcgcgattacctcgcggaaatccgaacggtgcagccggaaggc
ccctacctgatcggtggcttctcaggcggcggccttgtggcttacgagatggcgcagcag
cttcgcaaggccggagaaaagacggcactcgtcgttttactcgatacgccctaccccgcg
gacgtaccgctctcgatccaggatcggatcctgatgaagctccaggacatggagcgggaa
ggcgtggcgtttttcggaaactgggcccgccggcgtatagcgtgggaacgcaggcgcatg
gaagcgcgccgcaggcccgaatcgccgaagtctgccgagcaattccacaacgaggagctt
gaggcggcgtttcgccgggcgctgtcacgctaccggggccaaccctacggagagccggtg
ctactcatgcgacccaagcaagacgtacgctatcgcgtcacgggcaaccgtgccctcaat
gaggagcgcgctctgctgctgcccgacaacggctgggcgccttacgcagcaagtctctcg
gtgcaggaagtcccgggcgatcacgacagtatggtgctggagccgcacgtgcgcgttatg
gccagccgcctgcgcgaggcactggcgagcgccgaccgtggcccatcatctcggccgatt
gccgcagaatga
DBGET
integrated database retrieval system
