Hyphomicrobium nitrativorans: W911_08355
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Entry
W911_08355 CDS
T02943
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hni
Hyphomicrobium nitrativorans
Brite
KEGG Orthology (KO) [BR:
hni00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hni01002
]
W911_08355
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hni01011
]
W911_08355
Peptidases and inhibitors [BR:
hni01002
]
Cysteine peptidases
Family C82
W911_08355
Peptidoglycan biosynthesis and degradation proteins [BR:
hni01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
W911_08355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AHB48399
UniProt:
V5SEL5
LinkDB
All DBs
Position
1743941..1746265
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AA seq
774 aa
AA seq
DB search
MLRTVSLPAAVLAAVLTLPASGAWADPVPDRAAPAAKAATADAARREADEEHRKRAQAMT
RAAIEAQKRALDALAASEQKTAPKTEAAAAAAKPASKDTAVKDSASKESASEARAAASGA
PDRAQTDAVVDEIAERHRNEAEAAEQDIASPEAPPASAPAQTASEEAKTEDTPEVAAVDA
VEQPATEVATPAPVRADPVVEIVRTWLADASSKVTADKADLDAVTAFYGARTEAPLWVDA
KGFTAKGKTALNELNKAAEWGLSPDAFALPRFNVSEPSPGALAEAEARLSLELLKYARHA
RGGRITPSSVSMLLDVTPPVRDPNTVIAELAKSDAPDRYLKGLHPQHEGFKLLHKALLKA
RGPSKADVEVDPALLIRLPERPGVLRLGSDDPEIVQLRKRLKVPAEAGASETMFDEELEI
ALKAFQVEQQISVDGLLGNGTRRALNREVDGQRGPDPGRMVQLIELNMERWRWLPEDLGD
VHVWNNIPEYVTRVYKGDEVIFREKIIVGKPNTATPVFSADMDFVGFNPTWGMPNGIKQR
ELAPRLRRAAESGGGFLFFSSGPSPSDVIRAYGLNVFQNGRQINPDSVDWSRANVQNFSF
VQPPGPKNPLGQVKFIYRNKHDVYMHDTIEPGLFSSSNRALSNGCIRVQNPMEFAAIMLR
EGNGLDEGGVQRAIRGGGEIRHTNRIPVHMVYFTAQADENGKVSTFSDVYGLDGRISSAL
LGRALPRDPASVETASTEPVQQRPRAGQKGVSKSSSKYKAPQTLSDAITGFWLN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaaccgtttccctgcccgctgccgtgcttgccgccgttcttacgcttcccgcg
tcgggcgcgtgggcggaccccgtgccggatcgggcagctcccgcagcgaaggcggcgacg
gcggatgccgcgcggcgtgaggcggacgaggagcatcggaagcgggcgcaggcgatgacg
cgtgcggccatcgaagctcagaaacgggcgctcgatgcgttggctgcgagcgagcagaag
acggccccgaaaaccgaggcggctgccgctgcggcaaagcctgcttccaaagatacggcc
gtgaaagacagcgcttcgaaagagagcgcatccgaggcgcgtgctgcggcgtcgggcgcg
cccgacagggctcagaccgatgctgtcgtggacgagattgccgagcgtcatcgcaacgag
gccgaggcggccgaacaggatatcgcctctcccgaggctccgcccgccagcgcgccagca
caaaccgcatccgaagaagcgaagaccgaggacacccctgaggttgccgccgtcgatgcc
gtcgagcagcctgcgactgaggtcgcgacgcctgcgccggtgcgcgccgatcccgtcgtc
gagatcgtgcgcacctggcttgccgatgcgtccagcaaggtgacggcggataaagcggac
ctggatgccgtgacggcattctacggcgcgcggacggaggcgcctctgtgggtcgatgcc
aagggctttacggcgaagggtaaaaccgcgctcaacgaattgaacaaggctgccgagtgg
gggctttcgccggatgcgttcgcgctgccgcggttcaacgtttccgagccgtctccgggt
gcgctcgcggaagcggaagcccgtctcagcctcgaactcttgaagtacgcgcggcacgcc
cgcggcgggcgcatcacgccctcgtcggtgagcatgctgctcgacgtcacgccgccggtg
cgagatccgaacacggtcatcgcggagctggcgaagagcgacgcgcccgaccgttatctg
aaggggctgcatccgcagcatgaaggcttcaagctgctgcataaggcgctgctgaaggcg
cgcggtccgtcgaaagcggatgtcgaagtcgatcctgcgctgctgatccggctgccggag
cgccccggcgtgctgaggctcggcagcgacgatcctgagatcgtgcagcttcgcaagcgg
ctcaaggtgcctgcggaagccggtgcctcggagacgatgttcgacgaggagctcgaaatc
gcgctcaaggcgttccaggtggaacagcagatctcggtggacggcctcttgggcaacggc
acgcggcgcgcgctcaatcgcgaggtggacgggcagcgcggccccgatcccggacgcatg
gtccaactcatcgagcttaacatggagcgctggcggtggctgccggaggacctcggcgac
gtgcacgtctggaacaatatccctgagtacgtcacgcgcgtttacaagggcgacgaggtg
atcttcagggagaagatcattgtcggcaagccgaacactgcgacgccggtgttctcggcc
gacatggacttcgtgggcttcaatccgacgtggggcatgccgaacggcatcaagcagcgc
gagcttgcgccgcggcttcggcgcgcggccgagagcggcggcggcttcctgtttttcagc
tcggggccttcgccctcggatgtgatccgtgcctatggcctcaacgttttccagaacggg
cggcagatcaatccggatagcgtcgattggagccgggccaacgtgcagaacttcagcttc
gtgcagccgccggggccgaagaacccgctcggccaggtgaagttcatctaccgcaacaag
cacgacgtctacatgcacgacacgatcgagccgggcctgttctcaagctcgaaccgcgcg
ctttcgaacggctgcatccgtgtgcagaacccgatggagttcgcggccattatgctgcgt
gagggcaacgggctggatgagggcggtgtgcagcgggccattcgtggcggcggggagatc
cgtcatacgaaccgtattccggtgcacatggtctacttcaccgcgcaggcagacgaaaac
ggaaaggtgtcgacgttctccgacgtgtacggcctcgacgggcgcatctcgtcggcgctg
cttggccgtgcgcttccgcgcgatccggcaagcgttgagacggcttcgacggagcccgtg
cagcagcggccgcgcgcgggacagaagggtgtcagcaagtcgtcgtcgaagtacaaggcg
ccgcagacgctctccgacgcgattacgggcttctggctgaactga
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