Hyphomicrobium nitrativorans: W911_09080
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Entry
W911_09080 CDS
T02943
Name
(GenBank) thiouridylase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
hni
Hyphomicrobium nitrativorans
Pathway
hni04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
hni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
W911_09080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hni03016
]
W911_09080
Enzymes [BR:
hni01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
W911_09080
Transfer RNA biogenesis [BR:
hni03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
W911_09080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
NAD_synthase
Arginosuc_synth
QueC
DUF7411
ATP_bind_3
ThiI
Motif
Other DBs
NCBI-ProteinID:
AHB48510
UniProt:
V5SEM9
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All DBs
Position
complement(1888234..1889391)
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AA seq
385 aa
AA seq
DB search
MSSPILKTPAGDGRKRVVVAMSGGVDSSVVAALLARSGHDVIGITLQLYDHGEAVGRKGS
CCAGQDVEDARRVAQMLGIPHYVLDYEKRFSDAVMQSFAESYVAGETPIPCVTCNQQIKF
KDLLETARELGADLLATGHYIQRGEGADGPALFRARDADRDQSYFLFATTREQLADLWFP
LGGMRKSEVRDIAHDLGLLVAEKSDSQDICFVPKGRYSDVIERLKPGALTPGDIVHADGR
KLGEHAGIVNYTIGQRRGLGIPSPEPLYVLRLDATKNEVVVGPRAFLQTHTLVLRNVNWL
GDGALEDGAEVYARIRSSQAPQPATVSVDTAGTVTVTLRYGELGAAAGQACVLYADGADE
ARVLGGGWIAKAVKADTMDWLESSA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
gtgtcatcgcctatcctcaagactccggccggagacggccgcaagcgcgtggtcgtcgcc
atgtccggcggcgtggattcttccgtcgtcgccgccctcctcgcccgctccggacatgat
gtgatcggcattacgctccagttgtacgatcacggggaagcggtcggccgcaagggctcc
tgctgtgccggccaggatgtcgaggacgcccgccgcgtcgcgcagatgctcggcattccc
cattacgttctcgactacgagaagcgcttctcggacgccgtcatgcagtcgttcgccgaa
agctacgtcgcgggcgaaacgccgatcccctgcgtcacctgcaatcagcagatcaagttc
aaggatctcctggagacggcccgcgaactcggcgccgatctcctcgcgacaggtcattac
atccagcgcggcgaaggcgccgacggaccggcgctgttccgcgcccgcgacgccgaccgc
gaccagagctattttctgttcgccaccacgcgcgagcagcttgccgacctgtggttcccg
ctcggcggcatgcgcaaaagcgaggtccgcgacatcgcccacgacctcggcctcctcgtc
gcggaaaaatccgacagccaggacatctgcttcgtcccgaagggccgctacagcgatgtg
atcgagcggctgaagcccggcgcgctcacgcccggcgacatcgttcatgcggacgggcgc
aagctcggcgagcacgcgggaatcgtgaactacaccatcggccagcgccgcgggctcggc
atcccctcgcccgagccgctctacgtgctgcggctcgatgccacgaagaacgaggtggtg
gtggggccacgtgccttcttgcaaacacacacccttgttcttagaaacgtgaactggctg
ggtgacggcgcgcttgaggacggcgcggaggtttatgcccgcatccgttcgtcgcaggcg
ccgcagccggcaaccgtctcggtcgacaccgccggaaccgttacggtgacactgcgctat
ggagaattgggggcggccgccggtcaggcgtgcgtcctttacgcggacggcgcggacgaa
gcccgtgtattgggcggcggatggattgcgaaggccgtgaaggccgatacaatggactgg
ctggaatcgtctgcctga
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