Hyphomicrobium nitrativorans: W911_09980
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Entry
W911_09980 CDS
T02943
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hni
Hyphomicrobium nitrativorans
Brite
KEGG Orthology (KO) [BR:
hni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hni03032
]
W911_09980
03400 DNA repair and recombination proteins [BR:
hni03400
]
W911_09980
Enzymes [BR:
hni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
W911_09980
DNA replication proteins [BR:
hni03032
]
Prokaryotic type
DNA Topoisomerases
W911_09980
DNA repair and recombination proteins [BR:
hni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
W911_09980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Integrase_1
Motif
Other DBs
NCBI-ProteinID:
AHB48642
UniProt:
V5SDS6
LinkDB
All DBs
Position
2073282..2076050
Genome browser
AA seq
922 aa
AA seq
DB search
MTDTTDTPGSAGPSDIRPILIQDEMKRSYLEYAMSVIISRALPDVRDGLKPVHRRILYAM
QRLGLDWNKKHMKSSKVVGDTMGDFHPHGNLAIYDALVRLAQDFSMRVPLIDGQGNFGSV
DGDPPAAERYTEARLAKIAGLMLDDLEKETVDFKPNYDDRLLEPVVLPAKFPNLLVNGAG
GIAVGMATNIPPHNLGEVIDACMLMLDKPETTVEELTEIIPAPDFPTGGLILGRAGALAA
YHKGRGSIIMRARVEVEEIRKDREALIITAIPYQVNKKTLIEKIADLVREKRVEGIADIW
DETNREGMRIVIELKRDAIADVVLNQLWRYSDLQTSFGANMLAINGGKPEQLNLRDFIEA
FTSFRQDVVTRRTRYLLWKARDRAHVLVGLAIAVANIDEVIKLIRFSPSPAEAKAQLMER
HWPAKDMAPLIALIADPRHGLADDGTYQLSEEQAKAILELRLARLTALGRDEIGDELKKI
AEEIKEYLAILSSRLRIVDIVKGELTAIRDEFATPRKTEIVDIEGEVDDEDLIAREDVVV
TVSHKGYIKRVPLSTYRAQRRGGKGRSGMSTRDEDFVTQIFIASTHTPVLFFSSRGMCYR
MKVWRLPAATPQASGKALINLLPLAQGEVITSILPLPEDKETWSRLELMFATKGGNVRRN
ALTDFENINRNGKIAMKLDGEGGGDQIVSVAICSPEDDVLLTTAQGRCIRFLSKDEVRLF
KGRDSSGVRGIRLDDGDEVISMAILTHVDASPAERGAYLKQASQIRRSENGEDVEAGVEV
EAEADEEIEAVADLSPERYAELSAKEQFVLTVSERGFGKRSSSYEYRTSGRGGKGIVAMV
VNERNGNLRASFPIEDTDQIMLVTDGGQLIRCPVHDVRIAGRNTQGVRIFKTDAEERVVS
VERIPDDGEDESENGADELGEA
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgataccaccgatacgcccggctccgcgggtccgagcgacatccggcccatcctg
atccaggacgagatgaagcgctcgtaccttgagtacgcgatgagcgtcatcatcagccgt
gcgcttcccgacgtgcgcgatggattgaagcccgtgcatcggcgcatcctctacgcgatg
cagcgtctcgggctcgactggaacaagaagcacatgaagtcgtccaaggtggtgggcgac
acgatgggcgatttccatccgcacgggaacctcgcgatctacgatgcgctcgtgcgcctc
gcgcaggacttctcgatgcgcgtgccgctgatcgacgggcagggcaacttcggttccgtc
gatggcgatccgcccgcggccgagcgctacacggaggcgcggctcgcgaagatcgcgggg
ctgatgctcgacgatctcgaaaaggagacggtcgacttcaagccgaactacgacgaccgg
ctgctggagccggtggtgctgcccgcgaagtttccgaacctgctggtgaacggagccggc
ggcattgccgtcggtatggcgacgaacattccgccgcacaatctgggcgaagtgatcgac
gcgtgcatgctgatgctcgacaagcccgagacgacggtcgaggagctgacggagatcatt
cccgcgcccgacttcccgacgggcgggctcattctcgggcgcgccggtgcgcttgcggct
tatcacaagggacgcggctcgatcatcatgcgcgcccgcgtcgaagtggaggaaatccgc
aaggatcgcgaggcgctgatcatcacggcgatcccctatcaggtcaacaagaagacgctg
atcgagaagatcgccgacctcgtgcgcgagaagcgtgtggaaggcatcgcggatatctgg
gacgagaccaaccgcgaaggcatgaggatcgtcatcgagctcaagcgcgatgcgattgcg
gacgtggtgctgaaccagctctggcgctattcggatctgcaaacttcgttcggcgccaat
atgctggcgatcaacggcggcaagcccgagcagctcaatctgcgcgacttcatcgaggcg
tttacgagcttccgccaggacgtggtgacgcggcggacgcggtatctgctctggaaggcg
cgcgaccgggcgcatgtgttggtgggtcttgccattgcggttgccaacatcgacgaggtg
atcaagctgatccgcttctcgccctcgccggcggaagcgaaggcgcagctcatggagcgg
cactggcccgcaaaggacatggcgccgctgatcgcgctgatcgccgatccgcgccacggg
ctcgccgacgacggtacctatcagctttccgaggaacaggcgaaggcgatcctggagctg
cgtcttgcgcgccttacagcgctcgggcgcgacgagatcggggacgaactcaagaagatt
gcggaagagatcaaggagtatctcgcgatcctttcgtcgcgcctcaggatcgtggacatc
gtgaaaggcgagctcacggcgatccgggacgagttcgcgacaccgcgtaagacggagatc
gtcgacatcgaaggcgaggtcgacgacgaggacctgatcgcgcgcgaggacgtggtcgtc
acggtttcgcacaagggttatatcaagcgcgtgccgctctccacctatcgggcgcagcgg
cgcggcggcaagggccgctccggtatgtcgacgcgggacgaggatttcgtcacgcagatc
ttcatcgcctcgacgcataccccggtgctgttcttttcttcgcggggcatgtgctaccgc
atgaaggtgtggcgcttgccggctgccactccgcaggcgtcgggcaaggcgctgatcaac
ctgctgccgctggcgcagggcgaagtcatcacctccattctcccgctaccggaagacaag
gagacgtggagccggctcgaattgatgttcgcgaccaagggcggcaacgtgcggcgcaac
gcgctcaccgacttcgagaacatcaaccgcaacggcaagatcgccatgaagctcgacggc
gagggcgggggcgaccagatcgtctccgtcgcgatctgctcgccggaagacgacgttctg
ctgacgacggcgcagggccggtgcattcgcttcctcagcaaggacgaggtgcggctgttt
aaggggcgcgattcgtcgggcgtgcgcggtatccgtctcgacgacggcgacgaggtgatc
tcgatggcgatcctgacgcacgtggatgcgtcgcctgcggaacggggcgcctatctgaaa
caggcgtcccagatccgccgcagcgaaaacggcgaggacgtggaggcgggcgtcgaggtg
gaagccgaggcggacgaggagatcgaggccgtggccgatctctcgccggagcggtatgcc
gagctttccgcgaaggagcagttcgtgctcaccgtttcggagcggggcttcggcaagcgg
tcgtcgtcgtacgagtaccggacgagcgggcgcggcggcaaaggcatcgtcgccatggtc
gtcaacgagcgcaacggcaacctcagggcctcgttcccgatcgaggataccgaccagatc
atgctggtgacggacggcggccagctcattcgctgcccggtgcacgatgtccgtatcgcg
ggccgcaacacgcagggcgtgcggatcttcaagaccgacgctgaagagcgggtggtttcg
gtcgagcgtattcccgacgacggcgaggacgagagcgagaacggcgcggacgaactgggc
gaagcttaa
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