Hyphomicrobium nitrativorans: W911_10255
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Entry
W911_10255 CDS
T02943
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hni
Hyphomicrobium nitrativorans
Brite
KEGG Orthology (KO) [BR:
hni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hni03032
]
W911_10255
03400 DNA repair and recombination proteins [BR:
hni03400
]
W911_10255
Enzymes [BR:
hni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
W911_10255
DNA replication proteins [BR:
hni03032
]
Prokaryotic type
DNA Topoisomerases
W911_10255
DNA repair and recombination proteins [BR:
hni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
W911_10255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
CARME
Motif
Other DBs
NCBI-ProteinID:
AHB48688
UniProt:
V5SDT4
LinkDB
All DBs
Position
complement(2124079..2126814)
Genome browser
AA seq
911 aa
AA seq
DB search
MNVVIVESAAKAKTINKYLGSNYKVLASFGHVRDLPSKDGSVDPEQDFSMTWEIDQGSKK
IISEITEAVKKADKLILATDPDREGEAISWHLLDILEKKKALKKGLSVERVAFNAVTKDA
ILAALAAPRQIDEPLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCD
REAEIEAFRTDEYWTIEATLVTGKSEEFPARLHAIEGTTLKKLDIKDETTATEIKRALEK
GAFRVVSVESRDVKRNPYAPFATSTLQMDASRKLGFSAKQTMQVAQRLYEGIDVGGETVG
LITYMRTDGVTIIPEAINAIRGLIARDYSQKYVAPFVREYKTKAKNAQEAHEAIRPTDVK
RTPASVARYLDKDQARLYELIWKRAVASQMASAEFKQTTADIEVKGRDGKTYTLRATGSV
EKFDGFLKVYDEGRDDKIRVVEKGKEDTADDEDSNRRLPALAEGDALTDRGIEAEQHFTQ
PPPRYSEATLVKKMEELGIGRPSTYASTLAVLQERDYVRIDKKRLIPEDKGRLVIAFLES
FFKKYVEFDFTADLEEKLDLISAGDLEYKIVLRDFWRDFTAAVNEIKDLRVGDVLEALNE
LLGPHVFPAKEDGSDPRLCPKCGTGRLSLKISGKSGAFIGCGNYPDCKYTRQLSGDASGV
DGDRELGFDPDTGLPILVKSGRFGPYLQLGEGEGDEKPKRSSIPKGIDAANIDFEKAVQL
LSLPREVGIHPETGTPITAGLGRYGPFVQHDGTYANVESIEDVFTVGLNRAVTLLAEKRA
GKGGRFGRAAAKTVLKELGEHPGGGGKIQVLDGKYGPYVSHDKVNATVPKGMDPATLTVD
DAVRLLQERIAKGGGKKKPARGKAAAKAKPEKAESKPVKAKAKAPAKKAPAKKAATKAKK
PAAKAKASANG
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgtcatcgtagaatcggccgccaaggccaagacgatcaacaagtacctcggc
agcaactataaggtgctggcctccttcgggcacgtgcgcgacctgccgtccaaggacggc
tccgtcgacccggagcaggatttctccatgacgtgggagatcgaccagggctcgaagaag
atcatcagcgagatcacggaggccgtgaagaaggccgacaagctcatcctcgccaccgac
cctgatcgcgaaggcgaagccatctcctggcatttgctcgacatcctggaaaagaaaaag
gccctcaaaaagggcctttctgtcgagcgtgtcgcgttcaacgccgtcaccaaggacgca
attctcgcggccctcgccgccccacgccagatcgacgagccgctcgtcgacgcctatctc
gcccgccgcgcgctcgattatctcgtgggcttcacgctctcgccggtgctgtggcggaag
ctgcccggcgcgcgctcggcaggccgcgtacaatctgtcgccctccgcctcgtctgcgac
cgggaagccgagatcgaggctttccggaccgacgaatactggaccatcgaagcaaccctc
gtgacgggcaagagcgaggagttccctgcccgcctccacgccatcgagggcaccacgctc
aaaaagctcgacatcaaggacgagacgacggcaaccgagatcaagcgcgcgctcgaaaag
ggcgccttccgcgtggtgtccgtcgaaagccgcgacgtgaagcgcaatccttatgcgccc
ttcgccacctccacgttgcagatggacgcctcccgcaagctcggcttctccgccaagcag
accatgcaggtcgcccagcgtctctacgaaggcatcgacgtcggcggcgaaaccgtcggc
ctcatcacctacatgcgaaccgacggcgtcacgatcatccccgaggccatcaacgccatc
cgcgggctcatcgcgcgcgactattcgcagaagtacgttgcccccttcgtgcgcgaatat
aaaacgaaagccaagaacgctcaggaagcgcacgaagccatccgcccgaccgacgtcaag
cgcacgcccgcatccgtcgcccgctacctcgacaaggatcaggcccgcctctacgagctg
atctggaagcgcgccgtcgcgagccagatggcgtccgccgagttcaagcagacgaccgca
gacatcgaagtgaagggccgcgacggcaagacgtacacgctgcgcgccaccggctccgtc
gagaagttcgacggcttcctcaaggtctacgacgaaggccgtgacgacaagatccgcgtg
gtcgagaaggggaaggaagataccgccgacgacgaggactcaaaccgccgcctccccgcg
ctcgccgaaggcgacgcgctcaccgaccgcggcatcgaagccgagcagcacttcacgcag
ccgccgccgcgctattccgaagcgaccctcgtcaagaagatggaagaactcggcatcggc
cgcccgtcgacctacgcctcgaccctcgccgtgttgcaggagcgcgattacgtccgcatc
gacaagaaacgcctgatccccgaggacaagggccgcctcgtcatcgcgttcctcgaaagc
ttcttcaagaagtacgtcgagttcgacttcaccgccgaccttgaggaaaagctcgacctc
atctcggcgggcgacctggaatacaaaatcgtgctgcgcgatttctggcgcgacttcacc
gccgccgtgaacgagatcaaggatctgcgtgtcggcgacgtgctcgaagctttgaacgag
ttgctcgggccgcacgtcttccccgcaaaggaggacggctccgacccgcgcctctgcccc
aagtgcggcaccggccgcctctcgctcaagatctccggcaagtcgggcgccttcatcggc
tgcggcaattaccccgactgcaaatatacgcgtcagctttccggcgacgcctccggcgtg
gacggcgaccgcgagttgggcttcgaccccgacacaggcctccccatcctcgtgaagtcc
ggccgcttcggcccctaccttcagctcggcgagggcgaaggcgacgagaagccgaaacgc
tcgtccatcccgaagggcatcgacgcagccaacatcgacttcgaaaaggccgtgcagctc
ctctcgcttccgcgcgaagtcggcatccatcccgagaccggaacgccgatcaccgctggc
ctcggccgctacggccccttcgtgcagcacgacggcacctacgccaacgtcgagagcatc
gaggacgtgttcaccgtcggcttgaaccgcgcggtgacgctgctcgctgaaaagcgtgcc
ggcaaaggcggacgcttcggccgcgcagccgccaagaccgtcctcaaggagctcggcgag
catcccggcggcggcggcaagatccaggttctcgacggcaagtacggcccctacgtgagc
cacgacaaggtcaacgccaccgtgccgaagggtatggatccggcgacactgaccgtcgac
gacgccgtccgtctgctgcaggagcgcatcgccaagggcggcggcaagaagaagcccgca
cgcggcaaggccgccgcgaaggcgaagcccgagaaagccgaatccaagcccgtaaaggca
aaggccaaagcgcccgccaaaaaggcccccgcgaagaaggcggcgaccaaagccaagaag
cccgcggcaaaagcaaaagcgtcagccaacggctga
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