Hyphomicrobium nitrativorans: W911_11100
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Entry
W911_11100 CDS
T02943
Name
(GenBank) Apolipoprotein A1/A4/E
Organism
hni
Hyphomicrobium nitrativorans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
BORCS6
OmpH
Motif
Other DBs
NCBI-ProteinID:
AHB48826
UniProt:
V5SD85
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Position
2309982..2312963
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AA seq
993 aa
AA seq
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MSLGSVPPATTGAPAGAPPALPPSIARDVDDRDRGGRDLSDILSHFTSERPSDAPKSGSL
TAAVNRTLPPPLPNTVRSEPEKPEPPVDEANADGETSTRRAARRRPAGPPRGTVAANDDA
PSIGGLIYALEQKPSSAPFRYAAIATGVWTVICLAFSSIILRAEFAEGATFLSLLENPAT
FLTLTAIVVPIAVLWALALLAWRSEELRLRSSTMTEVAIRLAEPDRMAEQSVASLGQAVR
RQVAFMNDAISRALGRAGELEALVHNEVTALERSYEDNERKIRSLIQELAGERSALLGTS
ERVTETLKTLGTDIPTLIDKLSSQQLKLAGIIQGAGDNLTALESAVGQSTERLDHVLGGK
TQQLQVMLEGYTTGLESTLGNQTEHLQGMLEGYTTGLATALGARTDQLQDAIAGYVQTLD
TSLTDRTESLRLVFEEYARALDTSLGNRAQALDTQLVERTKALDAAFGQRLKTFDDSIVR
STMAIDSAVSEKARALTSALDTHARTFSETIARQAVNLDESLMHGIQSVRRTSENITRQS
LKAIEGLAGQSEMLKRVSENLLGQVHAVTNRFEGQGQAIMRAANSLENANFKIESTLQGR
HAELTSTMDRLSGKADEFGRFVEGFSSSMEGSLTSAEQRARAAAEQLRASAEEARQAALT
DLERFRVETGAEGERALEELRGRFASISTVVTEQLSSLHNRIDQTSDEVRQRASHAAAEI
AAEQRRLKEQMDRLPAATRENAEAMRRALQDQLRAIEQLSNLTTRSISSRDVTPPQQAQI
PAPNPASGGGSLTGAYVSAGRAPSPGDNRTLSSLGTPDLRTAASRPAPPAAASPYQALPR
PGPDGREGWSLGDLLARASRDDENHGPAHGHAAQPQPQPVGPVPFHNQIDAIARALDPAT
TAALWQRINAGQRGVMVRSIYTPEGQSIFDDLTLRYRTDPDLQRTVNHYLVDFENIRRDA
EHRDPSGRAVNAHLLSDMGRVYLFLAHVSGRIA
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcttggcagcgtgccgcccgccacgacgggcgcccccgccggcgcgccgccggcc
cttcccccctccatcgccagggacgtggacgaccgcgaccgcggcggtagggatctgtcg
gatatcctgtcccatttcacgtcggagcgcccatccgacgcgcccaaatccggctcgctg
acggctgccgtcaaccgcacgcttccacccccgctgccgaacacggtccgctccgagcca
gaaaagcccgagccgccggtcgacgaagcgaacgcggacggcgaaacgtcgacacgccgc
gcggcacgccgccgccccgcaggcccgcctcgcggcaccgtcgcggccaacgacgacgca
ccctccatcggcggcctcatctacgcgcttgagcagaagccgtcgtccgccccgttccgg
tacgccgccatcgcgaccggcgtctggactgtgatttgcctcgccttctcgtcgatcatc
ctgcgggccgaattcgccgagggcgcaacgttcctctcgcttctcgaaaacccggcgacg
ttcctgaccttgaccgcgatcgtcgtgcccatcgccgtgctttgggcgcttgcgcttctc
gcctggcggtcggaagagttgcggctacgatcctccaccatgacggaagtcgcgatccgc
cttgccgagccggaccgcatggccgaacagtcggtggcttctctgggccaggcggtgcgc
cggcaggtggcgttcatgaacgacgccatctcgcgcgcgctcggccgcgccggagaactc
gaagcgctcgtccacaacgaggtcacggccctcgaacgctcgtatgaggacaacgagcgc
aagatccgcagcctcattcaggaactggcgggcgagcgcagtgcgctgctcggcaccagc
gagcgcgtcaccgagacgttgaagacactcggcaccgacattccgacgctgatcgacaag
ctctccagccagcaactcaagctggcgggtatcatccagggcgcgggcgacaatctcacc
gcgttggaatcggccgtgggtcaaagtaccgagcgtctcgatcacgtgctgggcggcaag
acccagcagttgcaggtcatgctcgaaggctacacgacaggtctcgagtcgaccctcggc
aatcagaccgagcatctccagggcatgctcgaaggctatacgaccggcctcgccaccgcc
ctcggcgcgcgcaccgatcagttgcaggacgcgattgccggctacgtgcaaacgctcgac
acctcgctcacggatcgcaccgaaagcctgcgcctcgtcttcgaggaatatgcgcgcgcg
ctcgacacatctctcggcaaccgcgcgcaggccctcgacacgcagctcgtcgaacgcacg
aaggcgctggatgccgccttcggccagcggctcaagacgttcgacgactcgatcgttcgt
tcgacgatggcgatcgactcggcggtgtctgaaaaggcgcgcgccctcaccagcgcgctt
gacacgcatgcccgcacgttcagcgagacgatcgcgcgccaggccgtcaacctggacgag
agcctgatgcacggcatccaatccgtccgccgcacgagcgagaacatcacgcgccaatcg
ctcaaggccatcgaaggactcgcgggccagtcggagatgctgaagcgcgtgtccgagaac
ctgctcgggcaggtccacgccgtgaccaaccgcttcgagggccagggacaggcgatcatg
cgcgccgccaactcgctcgaaaacgccaacttcaaaatcgaatccacgctgcagggccgc
cacgccgagctgacgagcacgatggaccgcctctcgggcaaagccgacgagttcggccgg
ttcgtcgaagggttctcgtcgtcgatggaaggctcgctcacgagcgccgagcagcgcgcg
cgggccgcagccgagcaattgcgcgcgagcgccgaggaggcgcgccaggccgccctcacc
gatctcgaacgcttccgcgtcgaaacgggcgcggagggcgagcgcgccctcgaagagctg
cgcggccgcttcgcatcgatttcgaccgtcgtcaccgaacagctttcctcgctgcacaac
cgcatcgaccagacgtcggacgaggtgcgccagcgcgcgagccacgccgccgccgagatc
gccgccgagcagcggcgcctcaaggagcagatggaccgcctgcccgccgcgacgcgcgag
aacgcggaagcgatgcgccgcgccttgcaagaccagctccgcgcgatcgagcagctctcc
aacctgacgacgcgctcgatttcgagccgagacgtgaccccgccgcagcaggcgcagatc
ccggctccgaacccggccagcggcggcggatctctgaccggcgcttacgtctcggccgga
cgcgcgccctcgcctggcgacaaccgcaccctgagttcgctcggcacgccggatctgcgc
acggcagcgtcgcggcccgcgccgcctgctgccgcctcgccctatcaggccttgcctcgc
cccggcccagacgggcgcgaaggctggtcgctcggcgatcttttggcgcgcgcctcgcgc
gacgacgaaaaccacggtcctgcacacggccacgccgctcaaccgcagccgcaacccgtg
ggccccgttccgttccataatcagatcgacgccatcgcccgcgcgctcgatcccgcgacg
acggcggccctctggcagcgcatcaacgccggtcagcgcggcgtcatggtgcggtccatc
tacacgcccgaaggccagtcgatcttcgacgacctgacgctccgctaccgcaccgatccg
gacctgcagcggaccgtcaaccactacctcgtcgatttcgagaacatccgccgcgacgcc
gagcaccgcgatccctcgggacgcgccgtcaacgcccatctcttgtccgatatgggccgc
gtctacctgttcctcgcgcacgtcagcgggcgcatcgcttaa
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