Hyphomicrobium nitrativorans: W911_11545
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Entry
W911_11545 CDS
T02943
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hni
Hyphomicrobium nitrativorans
Pathway
hni00061
Fatty acid biosynthesis
hni00071
Fatty acid degradation
hni01100
Metabolic pathways
hni01212
Fatty acid metabolism
hni02024
Quorum sensing
hni04146
Peroxisome
Module
hni_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hni00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
W911_11545
00071 Fatty acid degradation
W911_11545
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
W911_11545
09145 Cellular community - prokaryotes
02024 Quorum sensing
W911_11545
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hni01004
]
W911_11545
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hni04147
]
W911_11545
Enzymes [BR:
hni01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
W911_11545
Lipid biosynthesis proteins [BR:
hni01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
W911_11545
Exosome [BR:
hni04147
]
Exosomal proteins
Exosomal proteins of breast milk
W911_11545
Exosomal proteins of breast cancer cells
W911_11545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4314
Motif
Other DBs
NCBI-ProteinID:
AHB48893
UniProt:
V5SEE6
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All DBs
Position
2398608..2400341
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AA seq
577 aa
AA seq
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MVSTETARGAAAPHAYAWLRSYPKDVQWTMAAAPRPLFSLIETAAAEHPDRPCANFLGSS
LTYREIADLVDRAAAGLQALGVIKGTKVGLFLPNSPTFIVYYFAVLKAGGVVVNYNPLYS
LDELTFQVKDSETELMVTLDLKILFEKVERLLTDKVLKGAVVCSFPALLPATKAVLFKLF
KSKELARPKASQARDVIRLEAEVLADPDTFTPVPIDPETDIAVLQYTGGTTGTPKGAMLT
HANVYLNVEQIVRWAPALVQGQEKVLAVLPFFHVFAMTVVLNLGVRIAAEQILMPRFTLS
DALDLITKHRPTLMPGVPTLFNAILNHPNIKSYDLTSLKFCISGGAALPLEIKERFEAVT
RCALVEGYGLSETSPVVTCNPLDGPVKSGSIGLPLPGTIVSLRDLTDPTREVPQGERGEV
CVAGPQVMKGYWNRPQDTQDQFVGEFVRTGDVGVMDKDGFFFIVDRIKDLIICSGYNVYP
RRVEEALYEHAAVEEVIVVGIADKYRGEAPKAFVKLKDGEEATKAILMKHLEAKLSKIEM
PADIEFRDTLPRTMIGKLSKKELKAEEVEKSKTKPGA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcactgagacggcccgaggcgccgccgcccctcatgcctatgcctggctcaga
agctaccccaaggacgtccagtggaccatggcggcagcgccgcggcccctgttcagcctc
atcgagacggccgctgcggagcacccggaccgtccctgtgcgaattttctgggttcgagc
ctcacctatcgagagatcgccgacctcgtggatcgcgcagccgccggcctccaggctctg
ggcgtcatcaaaggaaccaaggtcggcctcttcctgcccaacagcccgacgttcatcgtc
tactatttcgccgtcctcaaggccgggggcgtcgtcgtcaattacaacccgctctattcg
ctggacgaactcaccttccaggtgaaggacagcgagaccgagctgatggtgacgctcgat
ctcaagatcctgttcgagaaggtcgagcgcctcctgacagacaaggtgctgaagggcgcc
gtcgtctgctccttccccgcgctcctgcccgccaccaaggcggttctcttcaagctgttc
aaatcgaaagagctggcgcgcccgaaagcgtcccaggcccgcgacgtcatccgcctcgaa
gccgaggtgctggccgatcccgacacgttcacgcccgtccccatagatcccgaaaccgac
atcgccgtgctgcagtatactggcggcacgacaggcacccccaagggcgcgatgctgacc
cacgccaacgtttatctgaacgttgagcagatcgtccgctgggcgccggctttggtccag
ggccaggagaaggtgctcgccgtccttccgttcttccatgtcttcgcgatgacggtggtc
ctgaacctcggcgtgaggatcgcggccgaacagatcctcatgccgcgcttcacgctctcc
gacgcgctcgatctgatcaccaagcatcgccccaccctcatgccgggcgtgccgaccctc
ttcaacgcgatcctgaaccacccgaacatcaaatcctacgacctgacgagcctcaagttc
tgcatctcgggcggtgcggcacttccgttggaaatcaaggagcggttcgaggcggtcacg
cgctgcgcgctggtcgaaggctacggcctctcggagacctcgcccgtcgtcacgtgcaac
ccgctcgacggccccgtgaaaagcggctcgatcggccttcctctcccggggacgatcgtt
tcgttgcgcgacctcaccgatcccacacgcgaggtgccgcaaggcgaacggggcgaggtt
tgcgtcgcaggtcctcaggtgatgaagggctactggaaccgcccgcaggatacgcaggat
cagttcgtgggcgagttcgtccgcacgggcgatgtcggcgtcatggacaaggatggcttc
ttcttcatcgtcgaccggatcaaggacctcatcatctgctccggctataatgtctatccg
cgccgcgtcgaggaagcgctctacgagcacgccgccgtcgaggaagtcatcgtcgtcggc
atcgccgacaagtaccgcggcgaagcaccgaaagccttcgtgaagctcaaggacggcgag
gaagccaccaaggcgatcctcatgaaacatctcgaagccaagctctccaagatcgagatg
ccggccgatatcgaattccgcgacacgctgccacgaacgatgatcggcaagctctcgaaa
aaggagctgaaggcggaagaggtcgaaaaatccaagacgaaacccggcgcttga
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