Hyphomicrobium nitrativorans: W911_15005
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Entry
W911_15005 CDS
T02943
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hni
Hyphomicrobium nitrativorans
Pathway
hni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
W911_15005 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hni03019
]
W911_15005 (groEL)
03110 Chaperones and folding catalysts [BR:
hni03110
]
W911_15005 (groEL)
03029 Mitochondrial biogenesis [BR:
hni03029
]
W911_15005 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hni04147
]
W911_15005 (groEL)
Enzymes [BR:
hni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
W911_15005 (groEL)
Messenger RNA biogenesis [BR:
hni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
W911_15005 (groEL)
Chaperones and folding catalysts [BR:
hni03110
]
Heat shock proteins
HSP60 / Chaperonin
W911_15005 (groEL)
Mitochondrial biogenesis [BR:
hni03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
W911_15005 (groEL)
Exosome [BR:
hni04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
W911_15005 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
W911_15005 (groEL)
Exosomal proteins of breast cancer cells
W911_15005 (groEL)
Exosomal proteins of colorectal cancer cells
W911_15005 (groEL)
Exosomal proteins of bladder cancer cells
W911_15005 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHB49404
UniProt:
V5SHI6
LinkDB
All DBs
Position
complement(3108890..3110533)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFSQDARERMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMLREVASKTADLAGDGTTTATVLAQAIVKEGAKSVAAGANPMDLKRGI
DLAVQAVIDQLTAKSKKVTSNDEIAQVGTISANGDVEIGAKIAEAMKKVGNEGVITVEES
KSLETELDVVEGMQFDRGYLSPYFITNADKMIAELESPYILIHEKKVSGLQSMLPVLEAV
VQTGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTGGTV
ISEDVGIKLESVTLDMLGTAKRITIDKENTTVVDGSGKKADIEARVKQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALL
RAISALEKVTGVNDDQRVGVNIVRRALQAPARQIFQNAGEDGSVVAGKILENDKYAYGFN
AQSGKYGDLLAEGVIDPAKVVRCALQDAASVAGLLITTEAMVAEKPKKDAPAMPMGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaagttttctcaggacgcacgcgagcggatgctgcgcggcgtc
gacatcctcgccaacgccgtcaaggtgacgctgggccccaagggccgcaacgtcgtgatc
gagaagagcttcggcgccccgcgcatcaccaaggacggtgtgacggtcgccaaggagatc
gagctcgaagataagttcgagaatatgggcgcgcagatgctgcgtgaagttgcctcgaag
acggccgacctcgccggcgacggcaccaccaccgcaacggtgctcgcccaggcgatcgtc
aaggaaggcgcgaagtccgtcgccgccggcgccaacccgatggacctgaagcgcggcatc
gacctcgccgttcaggccgtcatcgaccagctcacggcgaagtcgaagaaggtcacctcc
aacgacgagatcgcccaggtcggcaccatctcggccaacggcgatgtcgagatcggcgcc
aagatcgccgaggccatgaagaaggtcggcaacgagggcgtcatcacggttgaagagagc
aagagcctcgaaaccgagctcgacgtcgtcgagggcatgcagttcgaccgcggctacctc
tcgccctacttcatcaccaacgccgacaagatgatcgcggagctggaaagcccctacatc
ctcatccacgagaagaaggtgtccggcctgcagtcgatgctgccggttctcgaagccgtc
gtgcagacgggcaagccgcttctcatcatcgccgaggacgtcgagggcgaagcgctcgcg
acgctcgtcgtcaacaagctgcgcggcggcctcaaggtcgcggccgtaaaggctccgggc
ttcggcgatcgccgcaaggccatgcttgaggacatcgctgttctcacgggcggcaccgtc
atcagcgaagacgtcggcatcaagcttgagagcgtcacgctcgacatgctgggcacggcg
aagcgcatcacgatcgacaaggaaaacaccaccgttgtcgacggttcgggcaagaaggcc
gacatcgaagcgcgcgtgaagcagatcaaggcgcagatcgaggaaaccacctcggactac
gaccgcgagaagctgcaggaacgtcttgcgaagctcgccggcggcgttgccgtgatcaag
gtcggcggtgccaccgaggtcgaggtgaaggagaagaaggatcgcgtcgacgacgcgctg
cacgcaacccgcgcagccgttgaagagggcatcgtccccggcggcggtgttgcgcttctc
cgcgccatcagcgcactcgaaaaggtgacgggcgtcaacgacgaccagcgtgtcggcgtg
aacatcgtgcgccgcgcgctgcaggcaccggcacgccagatcttccagaacgcaggtgag
gacggctccgtcgtcgccggcaagatcctggagaacgacaagtacgcctacggcttcaac
gcccagtccggcaagtacggcgatctcttggccgagggcgtgatcgacccggctaaggtc
gtgcgctgtgcgcttcaggacgcggcttccgtcgccggcctcctgatcacgaccgaggca
atggttgccgagaagcccaagaaggacgcccccgcgatgccgatgggcggcggaatgggc
ggcatgggtggcatggacttctag
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