Hyphomicrobium nitrativorans: W911_15665
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Entry
W911_15665 CDS
T02943
Name
(GenBank) ATPase AAA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hni
Hyphomicrobium nitrativorans
Pathway
hni03420
Nucleotide excision repair
hni03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
W911_15665
03430 Mismatch repair
W911_15665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hni03400
]
W911_15665
Enzymes [BR:
hni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
W911_15665
DNA repair and recombination proteins [BR:
hni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
W911_15665
MMR (mismatch excision repair)
Other MMR factors
W911_15665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DEAD
Tudor_1_RapA
DUF3553
AAA_11
DUF3638
Motif
Other DBs
NCBI-ProteinID:
AHB49512
UniProt:
V5SG86
LinkDB
All DBs
Position
complement(3253506..3256010)
Genome browser
AA seq
834 aa
AA seq
DB search
MPHDDKNAARRYPPVGAEDDLPPFDLPQVPGTGVQGAEGSASPVQRASISERARAAALPP
YLTGLNPEQREAVEALDGPVLVLAGAGTGKTRVLTTRIAHILATGRAYGSQILAVTFTNK
AAREMKHRIGGLVGGAVEAMPWLGTFHSIGVKILRRHAELVDLKSGFTILDTDDQLRLLK
QVIEAEGLDKDRWPARQLAGLIDGWKNRGLTPSKVPPGEGFAFGNGKGAALYAAYQKRLK
ELNAADFGDLLLETLRLFMEHPDVLADYHRRFRYILVDEYQDTNVVQYLWLRLIAQGSPN
ICCVGDDDQSIYGWRGAEVDNILRFEKDFPGARIIRLERNYRSTGNILAAASGLIAQNKG
RLGKTLFTDGETGDKVTVMGVWDDEEEARSVVREIEEQGKAGQRLNGIAILVRASFQMRA
FEDRFVTTGIPYRVIGGPRFYERAEVKDALAYLGVTLNPANDLKFERIVNVPKRGLGDTS
VERIHALARARDIPLFRAAREIVETEELGGKARKSLRDLVTAFERWRSLIDTMKHTELAE
LILDESGYTAHWQNDKSPQAQSRLENLKELVRFMHEFETLEAFLEHVSLVMDTEQGDDGE
RVSLMTLHAAKGLEFDTVFLPGWEEGLFPHQRALDESGEKGLEEERRLAYVGLTRARRQA
KVSFAQNRRTRGLYQSALPSRFVDDLPEANVEVLETKSPFGGAYQNFGNPFEGGFGRGGY
GKSRFDNAEPRFGATYDTPGWQRAQSYEKTKSRDENWSRDAEQRRRSAMRPTITIEGELI
ASSAAAGAGYAVGTRVRHQKFGLGTVTDVDGNKLTIEFDRAGRKRVVDSFVTPA
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacgatgacaaaaacgctgcccggcgatatccgcccgtaggcgcggaggacgat
cttccgccgttcgatctgccccaagtccccggaaccggggttcagggcgcggagggatcg
gcgtcgcctgttcagcgcgcgtccatttccgagcgcgcgcgggccgccgccttgccgccc
tatctgacgggcctcaaccccgagcagcgcgaagccgtcgaagcgctcgacggccccgtg
ctcgtgctcgcgggcgcaggcaccggcaagacgcgcgtcctcaccacgcgcatcgcccac
atcctggccacgggccgcgcctacggctcgcagatcctcgccgtgaccttcaccaacaag
gccgcccgcgagatgaagcaccgcatcggcggtctcgtcggtggcgcggtggaagccatg
ccctggctcggcaccttccactccatcggcgtcaagatcctgcgccgccacgcggagctt
gtggatctcaagtctggcttcacgatcctcgacaccgacgatcagttgcgcctcctgaaa
caggtcatcgaggccgaagggctcgacaaggaccgctggcccgcgcgtcagctcgcgggt
ctcatcgacggctggaagaatcgcggcctgacgccgtcgaaggttccgcccggcgaaggg
ttcgcattcggcaacggcaagggcgccgcgctttacgctgcctatcagaagcgcttgaag
gaactcaacgccgccgacttcggcgacctgctgcttgagacgctccgcctcttcatggag
caccccgacgtgctcgccgattatcaccgccgcttccgctacatcctggtggacgagtat
caggacaccaacgtcgtccaatacctgtggctgcgcctcatcgcgcaaggctcgccgaat
atctgctgcgtgggcgacgacgaccagtcgatctacggctggcgcggcgcagaggtcgac
aacatcctccgcttcgagaaggactttccgggcgcgcgcatcatccgcctcgaacgcaac
tatcgctcgaccggcaacatcctcgccgcggcgtccggcctcatcgcgcagaacaagggc
cgcctcggcaagacgctcttcaccgacggcgagacgggcgacaaggtcaccgtcatgggc
gtgtgggacgacgaggaggaggcccgctccgtcgtccgcgagatcgaggagcagggcaag
gccggccagcgcctcaacggcatcgcgatcctggtccgcgcgtccttccagatgcgcgcc
ttcgaagaccgcttcgtcaccaccggcattccctaccgcgtcatcggcggcccgcgcttc
tacgagcgtgccgaggtcaaggacgcgctcgcctatctcggcgtgaccctcaaccccgcc
aacgatctcaagttcgagcgcatcgtcaacgtgccgaagcgcggcctgggcgacaccagc
gtcgagcgcatccacgcgttggcgcgcgcccgcgacattccgctgttccgcgccgcgcgc
gaaatcgtggagacggaagagcttggcggcaaagcgcgcaaatcgctccgcgacttggtc
acggccttcgagcgctggcgcagcctcatcgacaccatgaagcacaccgagcttgccgag
ctgattctcgacgagagcggctacacggcccactggcaaaacgacaagagcccgcaggcg
cagtcgcgtctcgaaaacctgaaggagctcgtgcgcttcatgcacgagttcgagacgctc
gaagcgttcctcgaacacgtgagcctcgtcatggataccgagcagggcgacgacggcgag
cgcgtgagcctgatgacgctgcacgcggccaagggcctggagttcgacaccgtgttcctg
cccggctgggaggagggattgttcccgcaccagcgcgcgctcgacgaaagcggcgagaag
ggcctcgaagaggaacgccgcctcgcctatgtcggcctcacgcgcgcccgccgccaggcc
aaggtctcgttcgcccagaaccgccgcacgcgcgggctgtaccaatcggcgttgccctcg
cgcttcgtggacgacctccccgaagccaatgtcgaggtcctggaaacgaaaagcccgttc
ggcggcgcgtaccagaacttcggcaatcccttcgaaggcggtttcggccgcggcggctac
ggcaagagccggttcgacaacgcggaaccgcgcttcggcgccacctacgacacgccgggc
tggcagcgtgcgcaatcctacgagaaaacgaaatcgcgagacgagaactggtcgcgcgat
gccgagcagcgccggcgctcggccatgcgccccacgatcaccatcgagggcgaactgatc
gcctcctcggctgccgcgggagcgggttacgcggtcggcacccgcgtgcgccaccagaag
ttcggcctcggcacggtgaccgacgtggacggcaacaagctcaccatcgagttcgatcgt
gcggggcgaaaacgcgtggtcgacagcttcgtgacgccagcctga
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