Hyphomicrobium nitrativorans: W911_17170
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Entry
W911_17170 CDS
T02943
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
hni
Hyphomicrobium nitrativorans
Brite
KEGG Orthology (KO) [BR:
hni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hni03400
]
W911_17170
Enzymes [BR:
hni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
W911_17170
DNA repair and recombination proteins [BR:
hni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
W911_17170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AHB49728
UniProt:
V5SGR9
LinkDB
All DBs
Position
3592007..3595138
Genome browser
AA seq
1043 aa
AA seq
DB search
MTKPEGANIYTVEAGRPFLDCLAAAILDGTLPRAGGSAPSVLDLPSITLYLPTRRATRAL
QDAFRRAAGGRALLLPKVVPVSEGEEDLSLITAAASSQAGEMSAAIPPAISELERRLVLT
SLIRRWTETLAAQDGEGGLAVDVIASTSAQAAVLAHELAQLMDMVETEGVNLDRLAELVP
ETFSEHWQRTLRFLEVITQAWPGYLAGTGLMSAAARRNAVIRAEAERLRTAPPTAPVIVA
GVTGSIPATVELMRAVADLPNGAIVLPALDTALDDPSFARIAPEHPEHPQFGLKKLLDAL
GHDRRDVAHLGDVSSGGSRTRLISEAMRPAGTTALWEAFAAEARRDPATALPHGLSLVEA
PTAQDEAEAVALILREAAETPGRTAALVSPDRLLARRVAVRLEAWGITVDDSAGRPLRKT
PPGALLDLVIDAVETRFAPAAVVSLLKHPLARLGLDPFAVRRAARALELAAFRTPYLGDG
IAGLEAAFERASDNRAQGVRQHPAVDRLWDEDWQGAHDLIRRLSLAFTPLTEIYARDGDA
TLRDLADAHCKVAEAVTTLPVEDGMDTASECPLWRDEAGATAARFFASLLDDGLPPLDLP
AADYADLYRSLAAAETVRPRGPVHPRLFIWGPFEARLQQTDVVVLGSLNEGTWPQAADPG
PWLNRPMREALGLPSPEEKNGQAAHDFATLLAAPEVVLTRAAKKDGVPTVPSRWLLRLKA
LLDGMGAQHALTPKLPWLHWARERDRAKPEPRLAVPEPRPAVASRPRKLSVSRIETWIAN
PYAIFAREILGLQPLSPLGEQPGPALRGSIIHHALSEFAKAYPAALPENAEAELVRFARA
TLDAYAAHPRIAAFWVPRFARFAAWFAKTEAARREGVQQVTAEVAGELIFDAPGGPFKLT
ARADRIDIAAHGLVISDYKTGAPPTDRKVLAGASPQLPLEAAIALDTGPGFEKIAHLPVT
ALRYIRASGGEPPGEERDIKADDVAALAAQALDGLKRHVARFDDPATPYRPLRRSGFNYD
YDDYAHLARVAEWSSGATMQEEA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagccggaaggcgccaacatctacactgtcgaggccggacgcccgtttctcgac
tgtcttgccgcggccattctcgacggcacgctcccgagggcgggcgggtccgcaccgtcc
gtgctcgatctcccgagcatcactctctacctgccgacgcggcgcgccacgcgcgcgctc
caggatgcgtttcggcgtgccgctggcggccgcgcgctgctgcttccgaaagtcgtgccc
gtatccgagggcgaggaggatctttcgctcatcacggcagcggcgtcatcgcaggccggc
gagatgagcgccgccattccacctgccatttccgaactggaacggcgcctcgtgttgacg
agcctgatccggcgctggacggagacgttagctgcgcaagacggcgaaggtggcctcgcg
gtcgatgtcatcgccagcacctctgcccaggccgcggtgctggcgcacgaactggcacag
ctcatggacatggtggagaccgagggcgtgaacctcgaccgtcttgccgaactcgtgccc
gaaaccttctcggagcactggcaacggacgcttcgttttctggaagtaattacgcaggcg
tggcccggttatctcgcggggacgggattgatgtcggctgccgcacgtcgcaacgccgtg
atccgcgccgaggcggaacggctgcgaaccgcgccacccacagcgcctgttatcgtggcg
ggcgtcaccggatctatcccggcgaccgtcgaactgatgcgcgcggtggcggaccttccg
aacggcgcgatcgtgctgccggcgctcgatacggcgctcgacgatccgagctttgcgcgc
atcgcgcccgagcatcccgagcatccgcagttcggcctcaagaagctgctcgacgcgctt
ggacacgaccggcgcgacgtggcgcatctcggagacgtgtcgagcggtggatcgcggacg
cggctgatctcggaggcgatgcgccccgccgggacaacggcgctgtgggaagccttcgcc
gccgaagcgcgccgcgatcccgccacggcgctgccgcacggtctcagcctcgtcgaagcg
ccgacggcgcaggacgaagcggaggcggttgcgctgatcctgcgcgaagcggcggaaacg
cccggccgtacggcggctctcgtctcgcccgaccgcctgcttgcgcggcgggttgcggtg
cggctcgaagcctggggcatcacggtcgacgattccgccgggcgcccgctccgcaagacg
ccgcctggtgcgttgctcgatctcgtgatcgatgcggtggagacacgtttcgcgcctgct
gccgttgtctcgcttttgaagcatccactcgcgcggctcggtctcgacccgttcgcggtg
cgccgcgcggcgcgtgcgctcgaactcgcggcgttccggacgccctatctgggagacggg
atcgcaggtctcgaagcggcgttcgaacgggcatccgacaatcgggctcaaggcgtgcgt
cagcatcctgccgtcgaccggctgtgggacgaagactggcaaggcgcacacgatctgatc
cggcgtctctccctcgctttcacgccgctcaccgagatttacgcgcgcgacggcgacgcg
acgctccgcgatctcgcggatgcgcattgcaaggttgcggaggccgtgacgacgcttccg
gtggaagacggcatggacaccgcctcggaatgtccgctctggcgggacgaagccggcgcg
acggccgcgcgcttctttgcgagcctgctggacgacgggctgcctccgctcgatctcccc
gccgccgactacgccgatctctatcgcagtctcgcggccgccgagacggtgcgtccgcgc
ggccctgtgcatcccaggctgttcatttgggggccattcgaagcgcgtttgcagcaaacg
gacgtggtcgtgctcggctcgctcaacgagggcacgtggccacaagccgccgatcccggg
ccgtggctcaaccggccgatgcgagaagcgctcggattaccctcgccggaggaaaagaac
gggcaagccgcgcacgatttcgccacgctgcttgccgcacccgaggtcgtgctgacgcgc
gctgcgaagaaggatggcgtgccgaccgtgccgtcgcgctggctgctgcggctgaaagcg
ttgctcgacggcatgggcgcccagcatgcgctaacgcccaaactgccctggctccactgg
gcgcgcgagcgcgaccgggccaagcccgagccgcgtctcgcggtgcccgagccccgcccg
gcggtcgcgtcgcgcccgcgcaagctctcggtctcacggatcgagacatggatcgcgaac
ccgtatgcgatttttgcgcgcgagatcctgggtctccagccgctttcgccgctcggcgag
cagccgggaccggcgctgcgcggcagcatcattcatcacgcgctttcggaattcgcaaaa
gcgtatccggcggcgcttccagagaatgcggaagccgaactcgtccgctttgcgcgcgcc
acgctcgatgcttatgccgcgcatcctcgcatcgcggccttctgggtgccgcgcttcgca
cgcttcgccgcgtggttcgccaagacggaagccgcgcggcgcgagggcgtgcagcaggtg
acggccgaggtcgcaggagagctgattttcgacgcgccgggtgggccgttcaagctcacg
gcgagggcggaccgcatcgatatcgcggcgcacggcctcgtgatttccgactacaagacg
ggcgcgccgccgacggacaggaaagtgcttgcgggtgcgtctccgcagttgccgctggaa
gcggccatcgcgctcgataccggccccggcttcgagaagattgcgcacctccccgtcacc
gcgttgcgctacatccgcgcgtcgggcggcgaaccgccgggcgaggaacgcgacatcaag
gcggacgatgtggccgctctcgccgcgcaggcactcgatggtctcaagcggcatgtcgcg
cgcttcgacgatccggcgacgccttaccggcccttgcggcgctccggtttcaactacgat
tacgacgactacgcccacctcgcgcgcgtcgcggagtggtcgtcgggcgcgacgatgcaa
gaggaggcgtga
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