KEGG   Halobacterium noricense: LT974_00180
Entry
LT974_00180       CDS       T07823                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
hno  Halobacterium noricense
Pathway
hno03030  DNA replication
hno03410  Base excision repair
hno03420  Nucleotide excision repair
hno03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LT974_00180
   03410 Base excision repair
    LT974_00180
   03420 Nucleotide excision repair
    LT974_00180
   03430 Mismatch repair
    LT974_00180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hno03032]
    LT974_00180
   03400 DNA repair and recombination proteins [BR:hno03400]
    LT974_00180
DNA replication proteins [BR:hno03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    LT974_00180
DNA repair and recombination proteins [BR:hno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     LT974_00180
   MMR (mismatch excision repair)
    Other MMR factors
     LT974_00180
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    LT974_00180
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: UHH25382
LinkDB
Position
complement(30289..31032)
AA seq 247 aa
MFKAIVSADTLRETLDSVSVLVDECKIHLDEDGFSIRAVDPANVGMVDLDLGAAAFESYE
ADGGIIGVNLSRLEDIAGMADTDQLVQLELDEETRKLHIQIDGLEYTLALIDPDSIRQEP
DIPDLDLSANVVIEGADIDRSVRAADMVSDHIALGVDAADELFYVDAEGDTDDVHLELTR
DDLIDLEAGDAHSLFSLDYLKDMNKAIPKDAEVELELGDEYPVKIHFDIAEAQGHVTYML
APRIQSD
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcaaggcgattgtgagcgccgacacgctccgggaaacgctcgactccgtgagcgtg
ctggtggacgaatgcaaaatccacctcgacgaagacggcttctccatccgtgctgtcgac
cccgcgaacgtcggcatggtcgacctcgacctcggggcggccgcgttcgaatcctacgaa
gccgacggcggcatcatcggcgtcaacctctcgcgactggaggacatcgccggcatggcc
gacaccgaccagctcgtccaactcgaactcgacgaggagacccgcaagctccacatccag
attgacggcctcgaatacacgctcgcgctcatcgaccccgactctatccgccaggaaccc
gacatcccggacctcgacctctccgcgaacgtcgtcatcgagggcgcggacatcgaccgc
tccgtccgcgccgccgacatggtttcggaccacatcgcgctcggcgtcgacgccgccgac
gaactgttctacgtcgacgcggagggcgacaccgacgacgtccacctcgaactcacccgc
gacgacctcatcgacctcgaagcgggcgacgcccacagcctgttcagcctcgactacctc
aaggacatgaacaaggccatcccgaaagacgccgaggtcgaactcgaactcggcgacgag
tacccggtcaagattcacttcgacatcgccgaagcgcagggccacgtcacctacatgctc
gcgccgcggattcagtccgactaa

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