Halobacterium noricense: LT974_00525
Help
Entry
LT974_00525 CDS
T07823
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hno
Halobacterium noricense
Pathway
hno03022
Basal transcription factors
hno03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LT974_00525
09124 Replication and repair
03420 Nucleotide excision repair
LT974_00525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hno03021
]
LT974_00525
03036 Chromosome and associated proteins [BR:
hno03036
]
LT974_00525
03400 DNA repair and recombination proteins [BR:
hno03400
]
LT974_00525
Enzymes [BR:
hno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LT974_00525
Transcription machinery [BR:
hno03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LT974_00525
Chromosome and associated proteins [BR:
hno03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LT974_00525
DNA repair and recombination proteins [BR:
hno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LT974_00525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Zot
SLFN-g3_helicase
AAA_34
ATPase
HBB
SecA_DEAD
PhoH
DUF7563
Terminase_6N
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
UHH26871
LinkDB
All DBs
Position
86840..89074
Genome browser
AA seq
744 aa
AA seq
DB search
MEFFPKASPYDNQREAMDGIRDALDSGRDVLFEGACGTGKTLAALAPALSHARETNKTVV
ITTNVHQQMRQFVREAREIHDAAPLRAVVFKGKGSMCHIDVDYEECQVLRDNTHEVVDAE
RDKRQLEERQQALLEESQDGDSEAAEAREAVLDELDSVEDDLDDLREGNVCERYYDNLVG
DNDKFYEWLYDGVRTPEDIYDYADERGLCGYELLKDGIEGVDLAVCNYHHLLDPGIRAQF
FRWLGRDPEDVVVVFDEAHNVEDAARDHATRTLTENTLDSARSELEEVEENRSAAAERVL
SAFRDALVETYGDAFGPGGDGPALARSGVDGNWTDVPVANEDKRDALTLEFLRQYTGPGI
REDIDDALALGEYLDEEYDEAYRNGETTTRRECFVLEAAEFVESYVEDSGELGQYPTAAV
RRDEGTNDVYGRAELYTCIPRDVTTDLFDAVHASVLMSATLRPFDVTADVLGLDDPETMA
FGLQFPEERRRTFAVDTEPLFSSNRDDPATQREVAGALRDAVNFTPGNCLFFFPSYSEAE
RYHDLLGEAPRASESSSGRRSQDGGVDAARYLDEPGTSAEDLRQTFTDDRNGVLFTSLWG
TLAEGVSFDGDDARTVAVVGVPYPHLDARAEAVQDAYGRVFGDRDDRRNEDAGWRYAVEI
PTVRKTRQAMGRVIRSPDDFGVRMLVDRRYTKESRTAMRKYSVNPTFPAEERRELVDIDP
EKLRVSMLNFYTDLDAYDGTPPRP
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggagttcttcccgaaggcgtcgccgtacgacaaccagcgggaggcgatggacggcatc
cgcgacgccctcgacagcggccgtgacgtgctgttcgagggggcctgcgggactgggaag
actctcgctgcgctcgcgccggcgctctcgcacgcccgcgagacgaacaagacggtggtc
atcacgacgaacgtccaccagcagatgcgccagttcgtgcgtgaagcccgcgagattcac
gacgccgcgccgctgcgcgcggtcgtcttcaaggggaaggggtcgatgtgccacatcgac
gtcgactacgaggagtgccaggtgctccgcgacaacacccacgaagtcgtggacgccgaa
cgcgacaagcggcagttggaggaacgccagcaggccctcctcgaggagagtcaggacggc
gacagcgaagccgccgaagcccgcgaagccgtgctggacgaactcgactccgtggaggac
gacctcgacgacctccgggagggcaacgtctgcgagcgctactacgacaacctcgtcggg
gacaacgacaagttctacgagtggctctacgacggcgtccgcacccccgaggacatctac
gactacgccgacgagcgagggctctgcgggtacgaactcctgaaggacggcatcgagggc
gtggacctcgcggtctgcaactaccaccacctcctggacccggggattcgcgcgcagttc
ttccgctggttgggccgcgaccccgaggacgtggtggtggtgttcgacgaggcgcacaac
gtcgaggacgccgcccgcgaccacgccacgcggacgctcacggagaacaccctcgacagc
gcgcgctccgaattggaggaagtcgaggagaaccggtcggcggccgccgaacgcgtgctg
tcggcgttccgcgacgcgctcgtcgagacctacggggacgcgttcggtcccggtggcgac
ggtccggcactcgcccgctcgggagtggacgggaactggacggacgttcccgtggcgaac
gaggacaagcgcgacgccctcacgctcgaattcctccggcagtacaccggccccggcatc
cgggaggatatcgacgacgcgctcgcgctcggcgagtacctcgacgaggagtacgacgaa
gcctaccggaacggcgagacgaccacccgccgcgagtgcttcgtgctggaggccgcggag
ttcgtggagtcgtacgtcgaggacagcggcgaactcggccagtacccgaccgccgcagtg
cgccgcgacgagggaacgaacgacgtctacggccgcgcggaactgtacacgtgcatcccg
cgggacgtgacgacggacctcttcgacgccgtccacgcgagcgtcctgatgagcgcgacg
ctgcggccgttcgacgtcaccgcggacgtgctcgggctcgacgacccggagacgatggcg
ttcggcctccaattccccgaggagcgccgccgaacgttcgcggtggacacggagccgctg
ttctcctcgaaccgcgacgaccccgccacccagcgggaggtcgcgggcgcactccgggat
gccgtgaacttcacgcccgggaactgtctgttcttcttcccgagctacagcgaagccgaa
cgctaccacgacctgctcggcgaggcgccacgcgcctcggaatcgtcgagcgggcgtcgc
tcgcaagacggcggcgtggacgccgcgcgctacctcgacgaacccggcaccagcgccgaa
gacctccggcagacgttcactgacgaccgcaacggcgtcctgttcacgtcgctgtggggg
acgctcgcggagggcgtgagcttcgacggcgacgacgcccgcaccgtcgcggtcgtcggc
gtcccctacccgcaccttgacgcgcgcgccgaggccgtccaggacgcctacggccgcgtg
ttcggcgaccgcgacgaccgccgcaacgaggacgccggctggcgctacgccgtcgagatt
cccaccgtccgcaagacccggcaggcgatggggcgcgtcattcgctctcccgacgacttc
ggcgtgcgcatgctcgtcgaccgccgctacaccaaggagagccggaccgcgatgcgcaag
tacagcgtcaacccgacgttccccgccgaagaacgccgcgaattggtcgacatcgacccc
gagaaactccgcgtgtccatgctgaacttctacacggacctcgacgcctacgatggaacg
ccgcctcgtccgtga
DBGET
integrated database retrieval system
